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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0441700.1 9 Osa09LNG0441700 17637029-17642350 sense lncRNA 894 43.06488 3
Osa09LNT0442000.1 9 Osa09LNG0442000 17659384-17662227 long non-coding(lnc) isoforms of known genes 702 60.54131 6
Osa09LNT0441900.1 9 Osa09LNG0441900 17677715-17678411 intergenetic lncRNA (lincRNA) 697 50.50215 1
Osa09LNT0442100.1 9 Osa09LNG0442100 17734739-17738279 long non-coding(lnc) isoforms of known genes 3451 46.68212 2
Osa09LNT0442100.2 9 Osa09LNG0442100 17734739-17738279 long non-coding(lnc) isoforms of known genes 2579 50.40713 3
Osa09LNT0582800.1 9 Osa09LNG0582800 17775021-17775262 intergenetic lncRNA (lincRNA) 242 27.27273 1
Osa09LNT0442200.1 9 Osa09LNG0442200 17827936-17835013 sense lncRNA 1674 48.26762 5
Osa09LNT0442300.1 9 Osa09LNG0442300 17851431-17868798 long non-coding(lnc) isoforms of known genes 4309 50.49896 25
Osa09LNT0442400.1 9 Osa09LNG0442400 17961284-17965662 sense lncRNA 2631 45.458 4
Osa09LNT0442500.1 9 Osa09LNG0442500 17968429-17971287 long non-coding(lnc) isoforms of known genes 2470 44.33198 4
Osa09LNT0442600.1 9 Osa09LNG0442600 18001212-18003148 Antisense lncRNA 559 60.8229 2
Osa09LNT0442700.1 9 Osa09LNG0442700 18085556-18090832 long non-coding(lnc) isoforms of known genes 3628 48.59427 4
Osa09LNT0442800.1 9 Osa09LNG0442800 18097688-18100385 long non-coding(lnc) isoforms of known genes 1396 46.9914 3
Osa09LNT0442900.1 9 Osa09LNG0442900 18100543-18109784 long non-coding(lnc) isoforms of known genes 3475 43.97122 15
Osa09LNT0443000.1 9 Osa09LNG0443000 18150745-18155423 long non-coding(lnc) isoforms of known genes 2696 47.18101 19
Osa09LNT0443100.1 9 Osa09LNG0443100 18217459-18221122 long non-coding(lnc) isoforms of known genes 2230 51.16592 8
Osa09LNT0443400.1 9 Osa09LNG0443400 18223776-18230942 long non-coding(lnc) isoforms of known genes 3037 46.72374 13
Osa09LNT0443400.2 9 Osa09LNG0443400 18223776-18230942 long non-coding(lnc) isoforms of known genes 3083 46.67532 13
Osa09LNT0443200.1 9 Osa09LNG0443200 18240716-18245317 sense lncRNA 2688 56.54762 2
Osa09LNT0443300.1 9 Osa09LNG0443300 18272513-18273225 intergenetic lncRNA (lincRNA) 713 57.223 1
Osa09LNT0443600.1 9 Osa09LNG0443600 18316013-18322383 long non-coding(lnc) isoforms of known genes 3449 46.85416 7
Osa09LNT0443500.1 9 Osa09LNG0443500 18330008-18333054 long non-coding(lnc) isoforms of known genes 1122 52.76292 5
Osa09LNT0443700.1 9 Osa09LNG0443700 18475033-18476381 long non-coding(lnc) isoforms of known genes 1068 63.38951 4
Osa09LNT0443800.1 9 Osa09LNG0443800 18496976-18501218 long non-coding(lnc) isoforms of known genes 3884 44.28424 4
Osa09LNT0443900.1 9 Osa09LNG0443900 18514921-18515256 Antisense lncRNA 233 60.08584 2