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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0427300.1 9 Osa09LNG0427300 2226146-2227970 intergenetic lncRNA (lincRNA) 1681 47.29328 2
Osa09LNT0450600.1 9 Osa09LNG0450600 22287181-22291728 long non-coding(lnc) isoforms of known genes 1602 51.06117 7
Osa09LNT0450700.1 9 Osa09LNG0450700 22367879-22373612 long non-coding(lnc) isoforms of known genes 3277 46.71956 9
Osa09LNT0450900.1 9 Osa09LNG0450900 22405509-22414370 long non-coding(lnc) isoforms of known genes 2114 46.07379 11
Osa09LNT0450900.2 9 Osa09LNG0450900 22405509-22414370 long non-coding(lnc) isoforms of known genes 4230 39.64539 10
Osa09LNT0450800.1 9 Osa09LNG0450800 22459240-22461831 sense lncRNA 2111 42.16011 4
Osa09LNT0451000.1 9 Osa09LNG0451000 22507944-22510456 long non-coding(lnc) isoforms of known genes 1574 44.53621 10
Osa09LNT0451100.1 9 Osa09LNG0451100 22631214-22633487 long non-coding(lnc) isoforms of known genes 1600 53.0 3
Osa09LNT0451200.1 9 Osa09LNG0451200 22701807-22703104 long non-coding(lnc) isoforms of known genes 507 53.84615 4
Osa09LNT0451300.1 9 Osa09LNG0451300 22793297-22797763 long non-coding(lnc) isoforms of known genes 1893 50.23772 5
Osa09LNT0451400.1 9 Osa09LNG0451400 22811278-22814067 long non-coding(lnc) isoforms of known genes 2096 47.1374 6
Osa09LNT0451500.2 9 Osa09LNG0451500 22883138-22887559 long non-coding(lnc) isoforms of known genes 2430 49.71193 6
Osa09LNT0451500.1 9 Osa09LNG0451500 22883138-22887559 long non-coding(lnc) isoforms of known genes 2520 49.00794 5
Osa09LNT0452000.1 9 Osa09LNG0452000 22911567-22917101 long non-coding(lnc) isoforms of known genes 2513 47.59252 16
Osa09LNT0452100.1 9 Osa09LNG0452100 22925577-22928730 long non-coding(lnc) isoforms of known genes 1349 46.62713 5
Osa09LNT0577200.1 9 Osa09LNG0577200 2314508-2314783 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa09LNT0577300.1 9 Osa09LNG0577300 2314508-2314783 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa09LNT0427400.1 9 Osa09LNG0427400 2320603-2322676 long non-coding(lnc) isoforms of known genes 1921 42.79021 2
Osa09LNT0427500.1 9 Osa09LNG0427500 2335658-2349605 long non-coding(lnc) isoforms of known genes 1247 38.01123 3
Osa09LNT0427700.1 9 Osa09LNG0427700 2357522-2361313 long non-coding(lnc) isoforms of known genes 2598 45.34257 3
Osa09LNT0427600.1 9 Osa09LNG0427600 2364663-2370044 long non-coding(lnc) isoforms of known genes 1100 52.09091 5
Osa09LNT0577500.1 9 Osa09LNG0577500 2393516-2393787 intergenetic lncRNA (lincRNA) 272 25.73529 1
Osa09LNT0577400.1 9 Osa09LNG0577400 2393516-2393787 intergenetic lncRNA (lincRNA) 272 25.73529 1
Osa09LNT0427800.2 9 Osa09LNG0427800 2396780-2400017 long non-coding(lnc) isoforms of known genes 2906 33.0351 3
Osa09LNT0427800.3 9 Osa09LNG0427800 2396780-2400017 long non-coding(lnc) isoforms of known genes 2985 33.16583 2