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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0432500.2 9 Osa09LNG0432500 8710181-8716835 long non-coding(lnc) isoforms of known genes 1671 52.24417 8
Osa09LNT0432400.1 9 Osa09LNG0432400 8726758-8729699 long non-coding(lnc) isoforms of known genes 1198 41.06845 6
Osa09LNT0432700.1 9 Osa09LNG0432700 8879454-8883673 long non-coding(lnc) isoforms of known genes 2103 44.41274 4
Osa09LNT0432600.1 9 Osa09LNG0432600 8969210-8973862 long non-coding(lnc) isoforms of known genes 2808 46.33191 4
Osa09LNT0579800.1 9 Osa09LNG0579800 9119568-9119812 intergenetic lncRNA (lincRNA) 245 28.16327 1
Osa09LNT0579700.1 9 Osa09LNG0579700 9119568-9119812 intergenetic lncRNA (lincRNA) 245 28.16327 1
Osa09LNT0579900.1 9 Osa09LNG0579900 9165195-9165449 intergenetic lncRNA (lincRNA) 255 42.7451 1
Osa09LNT0432800.1 9 Osa09LNG0432800 9206699-9207247 intergenetic lncRNA (lincRNA) 454 44.93392 2
Osa09LNT0433000.2 9 Osa09LNG0433000 9379558-9383831 long non-coding(lnc) isoforms of known genes 1594 47.05144 9
Osa09LNT0433000.1 9 Osa09LNG0433000 9379558-9383831 long non-coding(lnc) isoforms of known genes 1616 47.09158 9
Osa09LNT0432900.1 9 Osa09LNG0432900 9397139-9398062 sense lncRNA 821 41.0475 2
Osa09LNT0580100.1 9 Osa09LNG0580100 9425748-9426007 intergenetic lncRNA (lincRNA) 260 28.46154 1
Osa09LNT0580000.1 9 Osa09LNG0580000 9425748-9426007 intergenetic lncRNA (lincRNA) 260 28.46154 1
Osa09LNT0433100.1 9 Osa09LNG0433100 9514331-9516927 long non-coding(lnc) isoforms of known genes 2169 52.42047 4
Osa09LNT0580300.1 9 Osa09LNG0580300 9603769-9604043 intergenetic lncRNA (lincRNA) 275 28.0 1
Osa09LNT0580200.1 9 Osa09LNG0580200 9603769-9604043 intergenetic lncRNA (lincRNA) 275 28.0 1
Osa09LNT0433200.2 9 Osa09LNG0433200 9663570-9665746 long non-coding(lnc) isoforms of known genes 1414 43.49364 5
Osa09LNT0433200.1 9 Osa09LNG0433200 9663570-9665746 long non-coding(lnc) isoforms of known genes 1592 43.09045 4
Osa09LNT0433300.1 9 Osa09LNG0433300 9689596-9691545 intronic lncRNA 780 48.84615 2
Osa09LNT0580400.1 9 Osa09LNG0580400 9850508-9850782 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa09LNT0580500.1 9 Osa09LNG0580500 9850508-9850782 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa09LNT0433400.1 9 Osa09LNG0433400 9970156-9978234 long non-coding(lnc) isoforms of known genes 1657 45.32287 9
Osa09LNT0433500.1 9 Osa09LNG0433500 9975608-9979385 long non-coding(lnc) isoforms of known genes 1509 53.34659 10
OsaMtLNT0452700.1 Mt OsaMtLNG0452700 111458-114259 intergenetic lncRNA (lincRNA) 2802 41.7202 1
OsaMtLNT0452800.1 Mt OsaMtLNG0452800 231448-234007 intergenetic lncRNA (lincRNA) 2560 48.67188 1