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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0454200.1 1 Osa01LNG0454200 1299679-1299923 intergenetic lncRNA (lincRNA) 245 25.30612 1
Osa01LNT0016400.1 1 Osa01LNG0016400 13174586-13174971 intergenetic lncRNA (lincRNA) 386 59.84456 1
Osa01LNT0016700.1 1 Osa01LNG0016700 13246387-13262169 long non-coding(lnc) isoforms of known genes 3384 41.60757 26
Osa01LNT0016700.2 1 Osa01LNG0016700 13246387-13262169 long non-coding(lnc) isoforms of known genes 3419 42.17607 25
Osa01LNT0016700.3 1 Osa01LNG0016700 13246387-13262169 long non-coding(lnc) isoforms of known genes 6408 39.34145 25
Osa01LNT0016600.1 1 Osa01LNG0016600 13294354-13294933 sense lncRNA 419 39.14081 2
Osa01LNT0016800.1 1 Osa01LNG0016800 13319342-13323798 long non-coding(lnc) isoforms of known genes 1341 50.63386 6
Osa01LNT0016900.1 1 Osa01LNG0016900 13389163-13392419 intergenetic lncRNA (lincRNA) 770 33.76623 2
Osa01LNT0017000.1 1 Osa01LNG0017000 13527300-13527580 intronic lncRNA 281 30.96085 1
Osa01LNT0017200.1 1 Osa01LNG0017200 13582078-13584915 long non-coding(lnc) isoforms of known genes 1188 50.50505 8
Osa01LNT0456300.1 1 Osa01LNG0456300 13697749-13697961 intergenetic lncRNA (lincRNA) 213 49.76526 1
Osa01LNT0017100.1 1 Osa01LNG0017100 13713086-13715124 intergenetic lncRNA (lincRNA) 1812 46.79912 2
Osa01LNT0017300.1 1 Osa01LNG0017300 13799955-13804722 long non-coding(lnc) isoforms of known genes 2649 49.03737 7
Osa01LNT0456400.1 1 Osa01LNG0456400 13919146-13919420 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa01LNT0456500.1 1 Osa01LNG0456500 13919146-13919420 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa01LNT0456600.1 1 Osa01LNG0456600 14259115-14259317 intergenetic lncRNA (lincRNA) 203 33.00493 1
Osa01LNT0017400.2 1 Osa01LNG0017400 14392028-14398576 long non-coding(lnc) isoforms of known genes 1630 44.47853 7
Osa01LNT0017400.1 1 Osa01LNG0017400 14392028-14398576 long non-coding(lnc) isoforms of known genes 1745 45.27221 7
Osa01LNT0017400.3 1 Osa01LNG0017400 14392028-14398576 long non-coding(lnc) isoforms of known genes 2585 43.17215 6
Osa01LNT0017500.1 1 Osa01LNG0017500 14457388-14458070 intergenetic lncRNA (lincRNA) 683 42.45974 1
Osa01LNT0017600.1 1 Osa01LNG0017600 14551012-14551278 intergenetic lncRNA (lincRNA) 267 38.20225 1
Osa01LNT0017700.1 1 Osa01LNG0017700 14553516-14554163 intergenetic lncRNA (lincRNA) 648 28.39506 1
Osa01LNT0017800.1 1 Osa01LNG0017800 14576601-14581963 sense lncRNA 4923 42.53504 2
Osa01LNT0017900.1 1 Osa01LNG0017900 14597822-14604783 sense lncRNA 4824 41.85323 5
Osa01LNT0018200.1 1 Osa01LNG0018200 14622914-14623796 long non-coding(lnc) isoforms of known genes 703 44.95021 2