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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0008300.1 1 Osa01LNG0008300 6094656-6096509 long non-coding(lnc) isoforms of known genes 1508 61.67109 4
Osa01LNT0008500.1 1 Osa01LNG0008500 6139190-6141952 long non-coding(lnc) isoforms of known genes 2180 54.08257 4
Osa01LNT0008600.1 1 Osa01LNG0008600 6242516-6244879 long non-coding(lnc) isoforms of known genes 1098 54.18944 4
Osa01LNT0000500.1 1 Osa01LNG0000500 640698-644217 long non-coding(lnc) isoforms of known genes 1448 49.10221 12
Osa01LNT0008700.1 1 Osa01LNG0008700 6455014-6455219 intronic lncRNA 206 26.21359 1
Osa01LNT0008800.1 1 Osa01LNG0008800 6500709-6507086 long non-coding(lnc) isoforms of known genes 3212 44.55168 9
Osa01LNT0008900.1 1 Osa01LNG0008900 6518152-6521026 long non-coding(lnc) isoforms of known genes 1934 54.80869 8
Osa01LNT0009000.1 1 Osa01LNG0009000 6557226-6557904 intergenetic lncRNA (lincRNA) 679 35.78792 1
Osa01LNT0009100.3 1 Osa01LNG0009100 6572140-6577148 long non-coding(lnc) isoforms of known genes 1608 47.07711 9
Osa01LNT0009100.2 1 Osa01LNG0009100 6572140-6577148 long non-coding(lnc) isoforms of known genes 2146 43.61603 9
Osa01LNT0009100.1 1 Osa01LNG0009100 6572140-6577148 long non-coding(lnc) isoforms of known genes 1647 47.966 9
Osa01LNT0009200.1 1 Osa01LNG0009200 6655876-6663178 Antisense lncRNA 1369 42.95106 4
Osa01LNT0009300.1 1 Osa01LNG0009300 6704187-6710552 long non-coding(lnc) isoforms of known genes 2896 49.13674 5
Osa01LNT0009400.2 1 Osa01LNG0009400 6738245-6763927 intergenetic lncRNA (lincRNA) 3545 49.87306 14
Osa01LNT0009400.1 1 Osa01LNG0009400 6738245-6763927 intergenetic lncRNA (lincRNA) 3791 48.95806 13
Osa01LNT0009400.3 1 Osa01LNG0009400 6738245-6763927 intergenetic lncRNA (lincRNA) 3342 50.35907 16
Osa01LNT0009400.4 1 Osa01LNG0009400 6738245-6763927 intergenetic lncRNA (lincRNA) 1865 46.86327 10
Osa01LNT0009500.1 1 Osa01LNG0009500 6764128-6765888 long non-coding(lnc) isoforms of known genes 1094 61.60878 3
Osa01LNT0009600.1 1 Osa01LNG0009600 6909800-6911947 long non-coding(lnc) isoforms of known genes 1083 57.52539 5
Osa01LNT0009700.1 1 Osa01LNG0009700 7095864-7098675 long non-coding(lnc) isoforms of known genes 1525 57.44262 4
Osa01LNT0009800.1 1 Osa01LNG0009800 7400923-7401126 intronic lncRNA 204 27.45098 1
Osa01LNT0009900.1 1 Osa01LNG0009900 7404911-7409638 long non-coding(lnc) isoforms of known genes 2302 44.26586 7
Osa01LNT0000600.1 1 Osa01LNG0000600 742860-745672 long non-coding(lnc) isoforms of known genes 2261 45.51084 5
Osa01LNT0010000.1 1 Osa01LNG0010000 7438897-7443214 long non-coding(lnc) isoforms of known genes 2060 43.39806 5
Osa01LNT0010100.1 1 Osa01LNG0010100 7472833-7476550 long non-coding(lnc) isoforms of known genes 2577 42.14203 4