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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0010200.1 1 Osa01LNG0010200 7590433-7592743 long non-coding(lnc) isoforms of known genes 1171 48.50555 7
Osa01LNT0010300.1 1 Osa01LNG0010300 7806682-7810969 long non-coding(lnc) isoforms of known genes 2034 43.06785 11
Osa01LNT0010400.1 1 Osa01LNG0010400 7857828-7860054 long non-coding(lnc) isoforms of known genes 1486 42.46299 6
Osa01LNT0010600.2 1 Osa01LNG0010600 7862088-7867709 long non-coding(lnc) isoforms of known genes 2353 45.77136 12
Osa01LNT0010600.1 1 Osa01LNG0010600 7862088-7867709 long non-coding(lnc) isoforms of known genes 3389 41.90027 11
Osa01LNT0010500.1 1 Osa01LNG0010500 7872790-7873664 intronic lncRNA 875 40.22857 1
Osa01LNT0010800.2 1 Osa01LNG0010800 7894961-7900549 long non-coding(lnc) isoforms of known genes 2532 41.94313 6
Osa01LNT0010800.1 1 Osa01LNG0010800 7894961-7900549 long non-coding(lnc) isoforms of known genes 1911 45.05495 7
Osa01LNT0010700.1 1 Osa01LNG0010700 7904338-7904892 intergenetic lncRNA (lincRNA) 555 65.04505 1
Osa01LNT0454800.1 1 Osa01LNG0454800 7991649-7991923 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa01LNT0454900.1 1 Osa01LNG0454900 7991649-7991923 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa01LNT0455000.1 1 Osa01LNG0455000 7992096-7992357 intergenetic lncRNA (lincRNA) 262 40.07634 1
Osa01LNT0000700.1 1 Osa01LNG0000700 804139-806932 long non-coding(lnc) isoforms of known genes 1390 41.72662 5
Osa01LNT0010900.1 1 Osa01LNG0010900 8047388-8055598 long non-coding(lnc) isoforms of known genes 4402 42.84416 17
Osa01LNT0011100.1 1 Osa01LNG0011100 8179040-8183105 long non-coding(lnc) isoforms of known genes 1225 48.40816 9
Osa01LNT0011000.1 1 Osa01LNG0011000 8184451-8184815 intergenetic lncRNA (lincRNA) 365 48.21918 1
Osa01LNT0011200.1 1 Osa01LNG0011200 8212480-8215091 long non-coding(lnc) isoforms of known genes 751 47.93609 7
Osa01LNT0011300.3 1 Osa01LNG0011300 8250831-8263554 intergenetic lncRNA (lincRNA) 3291 50.59253 13
Osa01LNT0011300.2 1 Osa01LNG0011300 8250831-8263554 intergenetic lncRNA (lincRNA) 1997 46.82023 11
Osa01LNT0011300.1 1 Osa01LNG0011300 8250831-8263554 intergenetic lncRNA (lincRNA) 3655 49.41176 14
Osa01LNT0011400.2 1 Osa01LNG0011400 8356553-8362270 long non-coding(lnc) isoforms of known genes 2345 43.24094 6
Osa01LNT0011400.1 1 Osa01LNG0011400 8356553-8362270 long non-coding(lnc) isoforms of known genes 2765 42.71248 4
Osa01LNT0011400.3 1 Osa01LNG0011400 8356553-8362270 long non-coding(lnc) isoforms of known genes 2086 43.91179 6
Osa01LNT0011500.1 1 Osa01LNG0011500 8367277-8373144 long non-coding(lnc) isoforms of known genes 2280 44.82456 7
Osa01LNT0011600.1 1 Osa01LNG0011600 8414471-8414684 Antisense lncRNA 214 45.79439 1