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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0455100.1 1 Osa01LNG0455100 9369681-9369885 intergenetic lncRNA (lincRNA) 205 25.36585 1
Osa01LNT0013500.1 1 Osa01LNG0013500 9394143-9396602 long non-coding(lnc) isoforms of known genes 621 51.36876 3
Osa01LNT0013600.1 1 Osa01LNG0013600 9626942-9630147 long non-coding(lnc) isoforms of known genes 970 54.02062 4
Osa01LNT0013700.1 1 Osa01LNG0013700 9644124-9651434 long non-coding(lnc) isoforms of known genes 3218 48.66377 10
Osa01LNT0013700.2 1 Osa01LNG0013700 9644124-9651434 long non-coding(lnc) isoforms of known genes 3307 48.32174 10
Osa01LNT0013800.1 1 Osa01LNG0013800 9670733-9675842 long non-coding(lnc) isoforms of known genes 1494 50.0 11
Osa01LNT0014000.1 1 Osa01LNG0014000 9793959-9800301 long non-coding(lnc) isoforms of known genes 1672 41.14833 11
Osa01LNT0013900.1 1 Osa01LNG0013900 9810245-9810675 intergenetic lncRNA (lincRNA) 431 67.98144 1
Osa01LNT0014100.1 1 Osa01LNG0014100 9889550-9894305 long non-coding(lnc) isoforms of known genes 1609 45.867 17
Osa10LNT0058700.1 10 Osa10LNG0058700 100437-103373 long non-coding(lnc) isoforms of known genes 1897 49.13021 8
Osa10LNT0059300.1 10 Osa10LNG0059300 1007665-1012906 long non-coding(lnc) isoforms of known genes 3265 45.39051 11
Osa10LNT0059100.1 10 Osa10LNG0059100 1016395-1017222 intergenetic lncRNA (lincRNA) 711 38.81857 2
Osa10LNT0066100.1 10 Osa10LNG0066100 10165148-10167567 intergenetic lncRNA (lincRNA) 522 40.42146 2
Osa10LNT0066200.2 10 Osa10LNG0066200 10216071-10218310 long non-coding(lnc) isoforms of known genes 1113 47.5292 4
Osa10LNT0066200.1 10 Osa10LNG0066200 10216071-10218310 long non-coding(lnc) isoforms of known genes 1647 45.90164 3
Osa10LNT0066300.1 10 Osa10LNG0066300 10305149-10305579 intergenetic lncRNA (lincRNA) 431 35.96288 1
Osa10LNT0059200.1 10 Osa10LNG0059200 1031403-1037595 sense lncRNA 4117 46.00437 7
Osa10LNT0066400.1 10 Osa10LNG0066400 10411125-10418560 long non-coding(lnc) isoforms of known genes 2478 47.94189 12
Osa10LNT0572700.1 10 Osa10LNG0572700 10472230-10472474 intergenetic lncRNA (lincRNA) 245 26.53061 1
Osa10LNT0572800.1 10 Osa10LNG0572800 10472230-10472474 intergenetic lncRNA (lincRNA) 245 26.53061 1
Osa10LNT0573000.1 10 Osa10LNG0573000 10472541-10472855 intergenetic lncRNA (lincRNA) 315 26.66667 1
Osa10LNT0572900.1 10 Osa10LNG0572900 10472541-10472855 intergenetic lncRNA (lincRNA) 315 26.66667 1
Osa10LNT0569100.1 10 Osa10LNG0569100 1051727-1052001 intronic lncRNA 275 28.36364 1
Osa10LNT0569200.1 10 Osa10LNG0569200 1051727-1052001 intronic lncRNA 275 28.36364 1
Osa10LNT0066500.1 10 Osa10LNG0066500 10539940-10544799 long non-coding(lnc) isoforms of known genes 785 55.41401 4