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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0090700.1 11 Osa11LNG0090700 5946387-5946999 intergenetic lncRNA (lincRNA) 613 33.93148 1
Osa11LNT0090900.1 11 Osa11LNG0090900 6088031-6091472 long non-coding(lnc) isoforms of known genes 1423 52.07309 6
Osa11LNT0091000.1 11 Osa11LNG0091000 6114798-6127569 long non-coding(lnc) isoforms of known genes 2687 44.13844 18
Osa11LNT0532700.1 11 Osa11LNG0532700 6139544-6139817 intergenetic lncRNA (lincRNA) 274 25.18248 1
Osa11LNT0532800.1 11 Osa11LNG0532800 6139544-6139817 intergenetic lncRNA (lincRNA) 274 25.18248 1
Osa11LNT0091100.1 11 Osa11LNG0091100 6201172-6205038 long non-coding(lnc) isoforms of known genes 1549 45.77147 6
Osa11LNT0533000.1 11 Osa11LNG0533000 6214240-6214514 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa11LNT0532900.1 11 Osa11LNG0532900 6214240-6214514 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa11LNT0533100.1 11 Osa11LNG0533100 6243303-6243558 intergenetic lncRNA (lincRNA) 256 28.125 1
Osa11LNT0091200.1 11 Osa11LNG0091200 6520202-6520894 Antisense lncRNA 369 62.33062 5
Osa11LNT0091300.1 11 Osa11LNG0091300 6538667-6546026 long non-coding(lnc) isoforms of known genes 3617 48.41028 4
Osa11LNT0091400.1 11 Osa11LNG0091400 6638306-6642853 sense lncRNA 3316 42.73221 2
Osa11LNT0083400.1 11 Osa11LNG0083400 664534-671668 long non-coding(lnc) isoforms of known genes 3620 45.46961 8
Osa11LNT0091500.1 11 Osa11LNG0091500 6685665-6693917 long non-coding(lnc) isoforms of known genes 1078 54.73098 4
Osa11LNT0091500.2 11 Osa11LNG0091500 6685665-6693917 sense lncRNA 802 54.73815 3
Osa11LNT0091500.3 11 Osa11LNG0091500 6685665-6693917 long non-coding(lnc) isoforms of known genes 3013 54.39761 3
Osa11LNT0091600.1 11 Osa11LNG0091600 6861930-6865491 long non-coding(lnc) isoforms of known genes 811 56.10358 3
Osa11LNT0083500.1 11 Osa11LNG0083500 705974-708769 long non-coding(lnc) isoforms of known genes 1047 60.64947 3
Osa11LNT0533200.1 11 Osa11LNG0533200 7076416-7076690 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0533300.1 11 Osa11LNG0533300 7076416-7076690 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0091700.2 11 Osa11LNG0091700 7121644-7124832 intergenetic lncRNA (lincRNA) 518 41.89189 3
Osa11LNT0091700.1 11 Osa11LNG0091700 7121644-7124832 intergenetic lncRNA (lincRNA) 524 41.79389 3
Osa11LNT0091800.1 11 Osa11LNG0091800 7200088-7214571 long non-coding(lnc) isoforms of known genes 896 47.43304 6
Osa11LNT0092100.1 11 Osa11LNG0092100 7250435-7254519 long non-coding(lnc) isoforms of known genes 2399 43.97666 8
Osa11LNT0092100.3 11 Osa11LNG0092100 7250435-7254519 long non-coding(lnc) isoforms of known genes 1431 49.26625 9
Osa11LNT0092100.2 11 Osa11LNG0092100 7250435-7254519 long non-coding(lnc) isoforms of known genes 1437 48.99095 9
Osa11LNT0092000.1 11 Osa11LNG0092000 7261709-7263191 long non-coding(lnc) isoforms of known genes 1089 59.50413 3
Osa11LNT0091900.1 11 Osa11LNG0091900 7315376-7316109 intergenetic lncRNA (lincRNA) 734 46.59401 1
Osa11LNT0092400.1 11 Osa11LNG0092400 7393345-7400652 intergenetic lncRNA (lincRNA) 2051 51.19454 10
Osa11LNT0533400.1 11 Osa11LNG0533400 7401720-7401942 intergenetic lncRNA (lincRNA) 223 54.70852 1
Osa11LNT0092200.1 11 Osa11LNG0092200 7412918-7413715 intergenetic lncRNA (lincRNA) 662 56.34441 2
Osa11LNT0092300.1 11 Osa11LNG0092300 7443918-7444127 intergenetic lncRNA (lincRNA) 210 57.61905 1
Osa11LNT0092500.2 11 Osa11LNG0092500 7584428-7588362 long non-coding(lnc) isoforms of known genes 2128 45.72368 6
Osa11LNT0092500.1 11 Osa11LNG0092500 7584428-7588362 long non-coding(lnc) isoforms of known genes 2215 45.05643 5
Osa11LNT0092600.2 11 Osa11LNG0092600 7639427-7643558 long non-coding(lnc) isoforms of known genes 1889 52.14399 4
Osa11LNT0092600.1 11 Osa11LNG0092600 7639427-7643558 long non-coding(lnc) isoforms of known genes 1882 52.23167 4
Osa11LNT0092700.1 11 Osa11LNG0092700 7712102-7717070 sense lncRNA 4725 41.5873 2
Osa11LNT0092800.1 11 Osa11LNG0092800 7785470-7788458 sense lncRNA 2722 53.01249 3
Osa11LNT0092900.1 11 Osa11LNG0092900 7799557-7803174 Antisense lncRNA 226 63.27434 2
Osa11LNT0093100.1 11 Osa11LNG0093100 7806382-7812891 Antisense lncRNA 1009 45.6888 3
Osa11LNT0093000.1 11 Osa11LNG0093000 7889088-7889559 intergenetic lncRNA (lincRNA) 472 46.39831 1
Osa11LNT0533500.1 11 Osa11LNG0533500 7920900-7921182 intergenetic lncRNA (lincRNA) 283 53.71025 1
Osa11LNT0093200.1 11 Osa11LNG0093200 8018430-8026512 long non-coding(lnc) isoforms of known genes 1507 48.3079 10
Osa11LNT0533600.1 11 Osa11LNG0533600 8074708-8074956 intronic lncRNA 249 26.10442 1
Osa11LNT0533700.1 11 Osa11LNG0533700 8074708-8074956 intronic lncRNA 249 26.10442 1
Osa11LNT0533800.1 11 Osa11LNG0533800 8196164-8196423 intergenetic lncRNA (lincRNA) 260 32.69231 1
Osa11LNT0533900.1 11 Osa11LNG0533900 8196490-8196734 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa11LNT0093300.1 11 Osa11LNG0093300 8202809-8203194 intergenetic lncRNA (lincRNA) 386 41.96891 1
Osa11LNT0093400.1 11 Osa11LNG0093400 8362865-8363798 intergenetic lncRNA (lincRNA) 934 50.6424 1
Osa11LNT0093500.2 11 Osa11LNG0093500 8379344-8382036 long non-coding(lnc) isoforms of known genes 1494 58.166 5