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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0093500.2 11 Osa11LNG0093500 8379344-8382036 long non-coding(lnc) isoforms of known genes 1494 58.166 5
Osa11LNT0093500.1 11 Osa11LNG0093500 8379344-8382036 long non-coding(lnc) isoforms of known genes 1657 55.52203 4
Osa11LNT0093500.3 11 Osa11LNG0093500 8379344-8382036 long non-coding(lnc) isoforms of known genes 2133 49.88279 4
Osa11LNT0534000.1 11 Osa11LNG0534000 8405832-8406106 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa11LNT0534100.1 11 Osa11LNG0534100 8405832-8406106 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa11LNT0093600.1 11 Osa11LNG0093600 8417487-8422716 long non-coding(lnc) isoforms of known genes 1730 46.5896 12
Osa11LNT0083600.1 11 Osa11LNG0083600 845289-846998 long non-coding(lnc) isoforms of known genes 1461 38.6037 2
Osa11LNT0534200.1 11 Osa11LNG0534200 8521160-8521376 intergenetic lncRNA (lincRNA) 217 42.39631 1
Osa11LNT0534300.1 11 Osa11LNG0534300 8577243-8577503 intergenetic lncRNA (lincRNA) 261 39.84674 1
Osa11LNT0534400.1 11 Osa11LNG0534400 8578017-8578261 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa11LNT0093700.1 11 Osa11LNG0093700 8720618-8721496 intergenetic lncRNA (lincRNA) 879 57.56542 1
Osa11LNT0534500.1 11 Osa11LNG0534500 8730972-8731246 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa11LNT0534600.1 11 Osa11LNG0534600 8730972-8731246 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa11LNT0093800.1 11 Osa11LNG0093800 8789845-8796864 long non-coding(lnc) isoforms of known genes 2462 48.25345 7
Osa11LNT0534800.1 11 Osa11LNG0534800 8843580-8843854 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0534700.1 11 Osa11LNG0534700 8843580-8843854 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0093900.3 11 Osa11LNG0093900 8970147-8977429 long non-coding(lnc) isoforms of known genes 3322 45.99639 9
Osa11LNT0093900.2 11 Osa11LNG0093900 8970147-8977429 long non-coding(lnc) isoforms of known genes 3052 46.46134 6
Osa11LNT0093900.1 11 Osa11LNG0093900 8970147-8977429 long non-coding(lnc) isoforms of known genes 3645 44.41701 9
Osa11LNT0094000.1 11 Osa11LNG0094000 9055846-9059309 long non-coding(lnc) isoforms of known genes 1619 50.21618 5
Osa11LNT0094100.1 11 Osa11LNG0094100 9079181-9085404 long non-coding(lnc) isoforms of known genes 1463 49.21394 9
Osa11LNT0094100.2 11 Osa11LNG0094100 9079181-9085404 long non-coding(lnc) isoforms of known genes 1376 50.0 10
Osa11LNT0094200.1 11 Osa11LNG0094200 9178505-9184294 long non-coding(lnc) isoforms of known genes 1327 45.5162 12
Osa11LNT0534900.1 11 Osa11LNG0534900 9322410-9322682 intergenetic lncRNA (lincRNA) 273 25.64103 1
Osa11LNT0535000.1 11 Osa11LNG0535000 9322410-9322682 intergenetic lncRNA (lincRNA) 273 25.64103 1
Osa11LNT0094300.1 11 Osa11LNG0094300 9463373-9466447 long non-coding(lnc) isoforms of known genes 2577 45.9449 2
Osa11LNT0083700.1 11 Osa11LNG0083700 947566-952283 long non-coding(lnc) isoforms of known genes 2978 45.3996 5
Osa11LNT0083800.1 11 Osa11LNG0083800 959445-963088 long non-coding(lnc) isoforms of known genes 829 43.06393 2
Osa11LNT0083800.2 11 Osa11LNG0083800 959445-963088 long non-coding(lnc) isoforms of known genes 960 56.5625 2
Osa11LNT0094400.1 11 Osa11LNG0094400 9674510-9675803 intergenetic lncRNA (lincRNA) 1294 52.47295 1
Osa11LNT0094500.1 11 Osa11LNG0094500 9724503-9727093 long non-coding(lnc) isoforms of known genes 2059 32.58864 6
Osa11LNT0535200.1 11 Osa11LNG0535200 9764410-9764684 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0535100.1 11 Osa11LNG0535100 9764410-9764684 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0094600.1 11 Osa11LNG0094600 9815907-9820202 long non-coding(lnc) isoforms of known genes 2010 44.32836 10
Osa11LNT0535300.1 11 Osa11LNG0535300 9967781-9968022 intergenetic lncRNA (lincRNA) 242 26.03306 1
Osa11LNT0535500.1 11 Osa11LNG0535500 9968092-9968317 intergenetic lncRNA (lincRNA) 226 26.99115 1
Osa11LNT0535400.1 11 Osa11LNG0535400 9968092-9968317 intergenetic lncRNA (lincRNA) 226 26.99115 1
Osa12LNT0123600.1 12 Osa12LNG0123600 10016678-10016898 sense lncRNA 221 38.00905 1
Osa12LNT0113200.1 12 Osa12LNG0113200 1012305-1015316 long non-coding(lnc) isoforms of known genes 883 44.50736 5
Osa12LNT0123700.1 12 Osa12LNG0123700 10136113-10139539 long non-coding(lnc) isoforms of known genes 1770 50.56497 3
Osa12LNT0561400.1 12 Osa12LNG0561400 10214990-10215264 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa12LNT0561300.1 12 Osa12LNG0561300 10214990-10215264 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa12LNT0123800.1 12 Osa12LNG0123800 10405232-10405829 intergenetic lncRNA (lincRNA) 598 38.46154 1
Osa12LNT0123900.1 12 Osa12LNG0123900 10406234-10406722 intergenetic lncRNA (lincRNA) 409 38.63081 2
Osa12LNT0124000.1 12 Osa12LNG0124000 10436138-10443948 long non-coding(lnc) isoforms of known genes 2117 51.11006 9
Osa12LNT0124100.1 12 Osa12LNG0124100 10454542-10458551 long non-coding(lnc) isoforms of known genes 561 47.59358 3
Osa12LNT0558300.1 12 Osa12LNG0558300 1058699-1058943 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa12LNT0558400.1 12 Osa12LNG0558400 1058699-1058943 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa12LNT0124200.1 12 Osa12LNG0124200 10606417-10611137 long non-coding(lnc) isoforms of known genes 3084 43.38521 3
Osa12LNT0113300.1 12 Osa12LNG0113300 1070162-1072495 intergenetic lncRNA (lincRNA) 1925 38.85714 4