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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa10LNT0067300.1 10 Osa10LNG0067300 11579844-11580779 intergenetic lncRNA (lincRNA) 817 40.88127 2
Osa10LNT0067400.1 10 Osa10LNG0067400 11596476-11599855 sense lncRNA 877 51.65336 3
Osa10LNT0067500.1 10 Osa10LNG0067500 11607182-11609027 Antisense lncRNA 383 52.21932 3
Osa10LNT0067900.2 10 Osa10LNG0067900 11649673-11659326 long non-coding(lnc) isoforms of known genes 2960 42.60135 6
Osa10LNT0067900.1 10 Osa10LNG0067900 11649673-11659326 long non-coding(lnc) isoforms of known genes 4009 45.92168 8
Osa10LNT0068000.2 10 Osa10LNG0068000 11807260-11817833 long non-coding(lnc) isoforms of known genes 2862 41.8239 15
Osa10LNT0068000.1 10 Osa10LNG0068000 11807260-11817833 long non-coding(lnc) isoforms of known genes 2847 41.83351 15
Osa10LNT0059900.2 10 Osa10LNG0059900 1189829-1203171 long non-coding(lnc) isoforms of known genes 2611 50.09575 9
Osa10LNT0059900.1 10 Osa10LNG0059900 1189829-1203171 long non-coding(lnc) isoforms of known genes 6895 47.84627 15
Osa10LNT0068100.1 10 Osa10LNG0068100 11955054-11956008 intergenetic lncRNA (lincRNA) 955 49.42408 1
Osa10LNT0068200.1 10 Osa10LNG0068200 12113672-12116360 long non-coding(lnc) isoforms of known genes 1889 46.58549 2
Osa10LNT0068300.1 10 Osa10LNG0068300 12121973-12125223 intergenetic lncRNA (lincRNA) 1065 44.31925 2
Osa10LNT0573600.1 10 Osa10LNG0573600 12220212-12220488 intergenetic lncRNA (lincRNA) 277 25.27076 1
Osa10LNT0573700.1 10 Osa10LNG0573700 12220212-12220488 intergenetic lncRNA (lincRNA) 277 25.27076 1
Osa10LNT0059800.1 10 Osa10LNG0059800 1223721-1227276 intergenetic lncRNA (lincRNA) 3483 43.38214 2
Osa10LNT0068400.1 10 Osa10LNG0068400 12307928-12311689 long non-coding(lnc) isoforms of known genes 3053 50.21291 6
Osa10LNT0068500.1 10 Osa10LNG0068500 12340872-12350821 long non-coding(lnc) isoforms of known genes 2396 50.20868 14
Osa10LNT0060000.1 10 Osa10LNG0060000 1268581-1269448 intergenetic lncRNA (lincRNA) 868 43.89401 1
Osa10LNT0068600.1 10 Osa10LNG0068600 12879408-12880884 long non-coding(lnc) isoforms of known genes 742 54.44744 2
Osa10LNT0068700.1 10 Osa10LNG0068700 12882240-12882972 sense lncRNA 247 51.82186 2
Osa10LNT0068800.1 10 Osa10LNG0068800 12899339-12902125 long non-coding(lnc) isoforms of known genes 1446 48.40941 4
Osa10LNT0068900.3 10 Osa10LNG0068900 13037019-13040650 long non-coding(lnc) isoforms of known genes 1803 44.2041 6
Osa10LNT0068900.2 10 Osa10LNG0068900 13037019-13040650 long non-coding(lnc) isoforms of known genes 2316 41.62349 6
Osa10LNT0068900.1 10 Osa10LNG0068900 13037019-13040650 long non-coding(lnc) isoforms of known genes 1975 44.4557 5
Osa10LNT0069000.3 10 Osa10LNG0069000 13080825-13084158 long non-coding(lnc) isoforms of known genes 2436 45.60755 5