\
RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

filter

Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0126800.2 12 Osa12LNG0126800 13487313-13490733 long non-coding(lnc) isoforms of known genes 1965 45.34351 6
Osa12LNT0126800.1 12 Osa12LNG0126800 13487313-13490733 long non-coding(lnc) isoforms of known genes 2181 44.47501 4
Osa12LNT0126900.1 12 Osa12LNG0126900 13512138-13513425 long non-coding(lnc) isoforms of known genes 969 57.27554 2
Osa12LNT0562300.1 12 Osa12LNG0562300 13524164-13524378 intergenetic lncRNA (lincRNA) 215 44.18605 1
Osa12LNT0127100.1 12 Osa12LNG0127100 13816007-13829762 long non-coding(lnc) isoforms of known genes 3418 52.51609 24
Osa12LNT0127000.1 12 Osa12LNG0127000 13920844-13921354 intergenetic lncRNA (lincRNA) 511 60.66536 1
Osa12LNT0127200.2 12 Osa12LNG0127200 14013372-14020317 long non-coding(lnc) isoforms of known genes 1921 41.3847 7
Osa12LNT0127200.1 12 Osa12LNG0127200 14013372-14020317 long non-coding(lnc) isoforms of known genes 4151 43.09805 13
Osa12LNT0562400.1 12 Osa12LNG0562400 14702337-14702591 intergenetic lncRNA (lincRNA) 255 26.66667 1
Osa12LNT0127300.1 12 Osa12LNG0127300 14746988-14747475 intergenetic lncRNA (lincRNA) 488 56.55738 1
Osa12LNT0127400.1 12 Osa12LNG0127400 14754353-14757981 sense lncRNA 652 51.38037 2
Osa12LNT0562600.1 12 Osa12LNG0562600 14784450-14784723 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa12LNT0562500.1 12 Osa12LNG0562500 14784450-14784723 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa12LNT0127500.1 12 Osa12LNG0127500 14907829-14916631 long non-coding(lnc) isoforms of known genes 2398 42.78565 15
Osa12LNT0114000.1 12 Osa12LNG0114000 1500415-1505644 long non-coding(lnc) isoforms of known genes 2458 47.35557 11
Osa12LNT0127600.1 12 Osa12LNG0127600 15133090-15133604 intronic lncRNA 515 53.78641 1
Osa12LNT0127700.1 12 Osa12LNG0127700 15139495-15139699 intronic lncRNA 205 22.92683 1
Osa12LNT0127800.1 12 Osa12LNG0127800 15469889-15470243 intergenetic lncRNA (lincRNA) 355 75.49296 1
Osa12LNT0128000.1 12 Osa12LNG0128000 15472945-15475350 long non-coding(lnc) isoforms of known genes 1140 49.5614 7
Osa12LNT0127900.1 12 Osa12LNG0127900 15507113-15508046 intergenetic lncRNA (lincRNA) 934 52.99786 1
Osa12LNT0114100.1 12 Osa12LNG0114100 1562209-1566509 long non-coding(lnc) isoforms of known genes 1789 44.15875 12
Osa12LNT0128100.1 12 Osa12LNG0128100 15728663-15754789 intergenetic lncRNA (lincRNA) 2838 46.26498 15
Osa12LNT0562700.1 12 Osa12LNG0562700 15814884-15815156 intergenetic lncRNA (lincRNA) 273 29.67033 1
Osa12LNT0562800.1 12 Osa12LNG0562800 15814884-15815156 intergenetic lncRNA (lincRNA) 273 29.67033 1
Osa12LNT0562900.1 12 Osa12LNG0562900 15878792-15879005 intergenetic lncRNA (lincRNA) 214 39.25234 1
Osa12LNT0128300.2 12 Osa12LNG0128300 15894622-15899503 long non-coding(lnc) isoforms of known genes 2716 43.7408 9
Osa12LNT0128300.1 12 Osa12LNG0128300 15894622-15899503 long non-coding(lnc) isoforms of known genes 2504 44.00958 9
Osa12LNT0114200.1 12 Osa12LNG0114200 1594471-1599099 long non-coding(lnc) isoforms of known genes 1112 49.19065 4
Osa12LNT0563000.1 12 Osa12LNG0563000 15953846-15954120 intergenetic lncRNA (lincRNA) 275 28.36364 1
Osa12LNT0563100.1 12 Osa12LNG0563100 15953846-15954120 intergenetic lncRNA (lincRNA) 275 28.36364 1
Osa12LNT0128200.1 12 Osa12LNG0128200 15989561-15990673 intergenetic lncRNA (lincRNA) 1113 52.65049 1
Osa12LNT0114300.1 12 Osa12LNG0114300 1606119-1613167 long non-coding(lnc) isoforms of known genes 1823 43.06089 17
Osa12LNT0128600.2 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 880 44.20455 3
Osa12LNT0128600.3 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 1626 46.61747 5
Osa12LNT0128600.1 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 1562 46.41485 12
Osa12LNT0563200.1 12 Osa12LNG0563200 16253173-16253373 intergenetic lncRNA (lincRNA) 201 49.25373 1
Osa12LNT0114400.2 12 Osa12LNG0114400 1634750-1645907 long non-coding(lnc) isoforms of known genes 1680 39.04762 10
Osa12LNT0114400.1 12 Osa12LNG0114400 1634750-1645907 long non-coding(lnc) isoforms of known genes 1756 38.95216 11
Osa12LNT0128400.1 12 Osa12LNG0128400 16404344-16406639 long non-coding(lnc) isoforms of known genes 1686 49.82206 3
Osa12LNT0128500.1 12 Osa12LNG0128500 16500219-16507887 long non-coding(lnc) isoforms of known genes 1489 55.87643 2
Osa12LNT0114500.1 12 Osa12LNG0114500 1650866-1652223 long non-coding(lnc) isoforms of known genes 931 45.43502 2
Osa12LNT0128700.3 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4222 46.58929 4
Osa12LNT0128700.2 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4063 46.83731 4
Osa12LNT0128700.1 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4428 46.16079 3
Osa12LNT0128800.1 12 Osa12LNG0128800 16685499-16692195 sense lncRNA 3447 46.79431 4
Osa12LNT0114600.1 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4953 41.57077 30
Osa12LNT0114600.2 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4957 41.59774 30
Osa12LNT0114700.1 12 Osa12LNG0114700 1689907-1690684 intergenetic lncRNA (lincRNA) 320 42.1875 3
Osa12LNT0114800.1 12 Osa12LNG0114800 1690776-1691604 intergenetic lncRNA (lincRNA) 426 60.32864 2
Osa12LNT0563300.1 12 Osa12LNG0563300 17030726-17030951 intergenetic lncRNA (lincRNA) 226 49.55752 1