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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa10LNT0070900.1 10 Osa10LNG0070900 14441451-14443188 intergenetic lncRNA (lincRNA) 967 41.05481 3
Osa10LNT0071000.2 10 Osa10LNG0071000 14474829-14478809 long non-coding(lnc) isoforms of known genes 1480 48.04054 10
Osa10LNT0071000.1 10 Osa10LNG0071000 14474829-14478809 long non-coding(lnc) isoforms of known genes 1497 47.96259 10
Osa10LNT0071100.1 10 Osa10LNG0071100 14513272-14520385 long non-coding(lnc) isoforms of known genes 3706 41.7701 2
Osa10LNT0060100.1 10 Osa10LNG0060100 1458094-1458762 intergenetic lncRNA (lincRNA) 669 42.15247 1
Osa10LNT0071200.1 10 Osa10LNG0071200 14662495-14663728 intergenetic lncRNA (lincRNA) 1234 57.13128 1
Osa10LNT0071300.1 10 Osa10LNG0071300 14741355-14741556 intronic lncRNA 202 36.63366 1
Osa10LNT0071400.3 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 1995 50.87719 4
Osa10LNT0071400.2 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 2088 50.09579 5
Osa10LNT0071400.1 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 2420 48.47107 4
Osa10LNT0071500.1 10 Osa10LNG0071500 14776372-14779039 long non-coding(lnc) isoforms of known genes 1295 47.18147 7
Osa10LNT0071700.1 10 Osa10LNG0071700 14869094-14872480 long non-coding(lnc) isoforms of known genes 2251 40.73745 5
Osa10LNT0071600.1 10 Osa10LNG0071600 14894291-14900908 sense lncRNA 4869 44.0953 4
Osa10LNT0071800.1 10 Osa10LNG0071800 14904210-14912952 long non-coding(lnc) isoforms of known genes 6867 43.1047 6
Osa10LNT0071800.2 10 Osa10LNG0071800 14904210-14912952 long non-coding(lnc) isoforms of known genes 6790 43.13697 6
Osa10LNT0071900.2 10 Osa10LNG0071900 14952758-14959713 long non-coding(lnc) isoforms of known genes 3773 43.28121 6
Osa10LNT0071900.1 10 Osa10LNG0071900 14952758-14959713 long non-coding(lnc) isoforms of known genes 3860 43.39378 5
Osa10LNT0574000.1 10 Osa10LNG0574000 15099345-15099562 intergenetic lncRNA (lincRNA) 218 48.16514 1
Osa10LNT0072000.1 10 Osa10LNG0072000 15191710-15194372 intergenetic lncRNA (lincRNA) 2524 39.02536 2
Osa10LNT0072100.1 10 Osa10LNG0072100 15220811-15223119 long non-coding(lnc) isoforms of known genes 1930 49.68912 3
Osa10LNT0072200.1 10 Osa10LNG0072200 15229583-15234593 long non-coding(lnc) isoforms of known genes 1655 51.72205 10
Osa10LNT0574100.1 10 Osa10LNG0574100 15278540-15278743 intergenetic lncRNA (lincRNA) 204 26.96078 1
Osa10LNT0060200.1 10 Osa10LNG0060200 1541239-1548037 long non-coding(lnc) isoforms of known genes 3359 44.83477 4
Osa10LNT0574200.1 10 Osa10LNG0574200 15513235-15513493 intergenetic lncRNA (lincRNA) 259 22.00772 1
Osa10LNT0072300.1 10 Osa10LNG0072300 15637609-15644400 long non-coding(lnc) isoforms of known genes 3038 49.04542 14