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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa10LNT0078600.2 10 Osa10LNG0078600 21440286-21443621 long non-coding(lnc) isoforms of known genes 1775 50.8169 10
Osa10LNT0078600.1 10 Osa10LNG0078600 21440286-21443621 long non-coding(lnc) isoforms of known genes 1284 51.94704 10
Osa10LNT0078700.1 10 Osa10LNG0078700 21445880-21453580 long non-coding(lnc) isoforms of known genes 4314 47.4038 20
Osa10LNT0078800.1 10 Osa10LNG0078800 21479351-21481798 long non-coding(lnc) isoforms of known genes 1498 43.39119 7
Osa10LNT0078900.1 10 Osa10LNG0078900 21504635-21505910 intergenetic lncRNA (lincRNA) 1095 41.00457 3
Osa10LNT0575200.1 10 Osa10LNG0575200 21526950-21527192 intronic lncRNA 243 33.74486 1
Osa10LNT0079000.1 10 Osa10LNG0079000 21707054-21710942 long non-coding(lnc) isoforms of known genes 1747 44.30452 11
Osa10LNT0079100.1 10 Osa10LNG0079100 21774188-21776862 long non-coding(lnc) isoforms of known genes 1420 65.0 7
Osa10LNT0079400.1 10 Osa10LNG0079400 21988742-21993690 long non-coding(lnc) isoforms of known genes 3957 43.39146 6
Osa10LNT0079400.2 10 Osa10LNG0079400 21988742-21993690 long non-coding(lnc) isoforms of known genes 4178 43.01101 5
Osa10LNT0079500.2 10 Osa10LNG0079500 21989161-21990546 sense lncRNA 758 46.43799 4
Osa10LNT0079500.1 10 Osa10LNG0079500 21989161-21990546 sense lncRNA 865 42.42775 2
Osa10LNT0079600.2 10 Osa10LNG0079600 21991294-21992306 Antisense lncRNA 605 42.47934 4
Osa10LNT0079600.1 10 Osa10LNG0079600 21991294-21992306 Antisense lncRNA 720 41.94444 3
Osa10LNT0079600.3 10 Osa10LNG0079600 21991294-21992306 Antisense lncRNA 637 41.44427 3
Osa10LNT0079700.1 10 Osa10LNG0079700 21992431-21993492 Antisense lncRNA 552 45.28986 4
Osa10LNT0079200.1 10 Osa10LNG0079200 21995563-21999001 long non-coding(lnc) isoforms of known genes 1638 43.04029 4
Osa10LNT0575400.1 10 Osa10LNG0575400 21999847-22000063 intergenetic lncRNA (lincRNA) 217 39.63134 1
Osa10LNT0575300.1 10 Osa10LNG0575300 21999847-22000063 intergenetic lncRNA (lincRNA) 217 39.63134 1
Osa10LNT0575500.1 10 Osa10LNG0575500 22001122-22001366 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa10LNT0079300.1 10 Osa10LNG0079300 22006968-22009949 intergenetic lncRNA (lincRNA) 782 57.54476 4
Osa10LNT0079800.2 10 Osa10LNG0079800 22024205-22029722 long non-coding(lnc) isoforms of known genes 1991 43.99799 9
Osa10LNT0079800.1 10 Osa10LNG0079800 22024205-22029722 long non-coding(lnc) isoforms of known genes 1988 43.96378 9
Osa10LNT0079900.1 10 Osa10LNG0079900 22030634-22036252 long non-coding(lnc) isoforms of known genes 3906 46.03175 9
Osa10LNT0080000.1 10 Osa10LNG0080000 22080046-22083302 long non-coding(lnc) isoforms of known genes 1360 49.92647 9