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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0095400.1 11 Osa11LNG0095400 11401367-11401616 Antisense lncRNA 250 27.6 1
Osa11LNT0095500.2 11 Osa11LNG0095500 11407302-11411295 long non-coding(lnc) isoforms of known genes 2387 53.41433 8
Osa11LNT0095500.1 11 Osa11LNG0095500 11407302-11411295 long non-coding(lnc) isoforms of known genes 2794 51.00215 6
Osa11LNT0536200.1 11 Osa11LNG0536200 11420869-11421076 intergenetic lncRNA (lincRNA) 208 43.75 1
Osa11LNT0095600.1 11 Osa11LNG0095600 11703417-11703754 intronic lncRNA 338 36.98225 1
Osa11LNT0095700.1 11 Osa11LNG0095700 11712800-11716306 long non-coding(lnc) isoforms of known genes 2442 45.3317 5
Osa11LNT0095700.2 11 Osa11LNG0095700 11712800-11716306 long non-coding(lnc) isoforms of known genes 1572 49.93639 6
Osa11LNT0082200.1 11 Osa11LNG0082200 117292-124378 long non-coding(lnc) isoforms of known genes 3271 46.2244 15
Osa11LNT0095800.1 11 Osa11LNG0095800 11736082-11739401 long non-coding(lnc) isoforms of known genes 1782 51.06622 7
Osa11LNT0095900.2 11 Osa11LNG0095900 11744815-11760956 long non-coding(lnc) isoforms of known genes 1114 51.3465 5
Osa11LNT0095900.1 11 Osa11LNG0095900 11744815-11760956 long non-coding(lnc) isoforms of known genes 933 51.66131 4
Osa11LNT0084300.1 11 Osa11LNG0084300 1180283-1182666 intergenetic lncRNA (lincRNA) 325 57.53846 2
Osa11LNT0082000.1 11 Osa11LNG0082000 1180-4230 long non-coding(lnc) isoforms of known genes 666 45.64565 5
Osa11LNT0084400.1 11 Osa11LNG0084400 1183841-1184342 intergenetic lncRNA (lincRNA) 502 46.21514 1
Osa11LNT0096000.1 11 Osa11LNG0096000 11871375-11879058 long non-coding(lnc) isoforms of known genes 2965 45.86847 8
Osa11LNT0096000.2 11 Osa11LNG0096000 11871375-11879058 long non-coding(lnc) isoforms of known genes 2993 45.77347 7
Osa11LNT0536400.1 11 Osa11LNG0536400 11933030-11933303 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa11LNT0536300.1 11 Osa11LNG0536300 11933030-11933303 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa11LNT0536500.1 11 Osa11LNG0536500 11958925-11959201 intergenetic lncRNA (lincRNA) 277 26.35379 1
Osa11LNT0536600.1 11 Osa11LNG0536600 11958925-11959201 intergenetic lncRNA (lincRNA) 277 26.35379 1
Osa11LNT0096100.2 11 Osa11LNG0096100 12010689-12013524 intergenetic lncRNA (lincRNA) 2073 44.62132 3
Osa11LNT0096100.1 11 Osa11LNG0096100 12010689-12013524 intergenetic lncRNA (lincRNA) 2192 44.11496 2
Osa11LNT0096200.1 11 Osa11LNG0096200 12143152-12148328 intergenetic lncRNA (lincRNA) 1477 38.99797 6
Osa11LNT0096300.1 11 Osa11LNG0096300 12510081-12511257 long non-coding(lnc) isoforms of known genes 830 40.84337 2
Osa11LNT0536700.1 11 Osa11LNG0536700 12778441-12778696 intergenetic lncRNA (lincRNA) 256 26.95312 1