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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0169700.1 2 Osa02LNG0169700 21853655-21863574 long non-coding(lnc) isoforms of known genes 4036 42.98811 13
Osa02LNT0169600.1 2 Osa02LNG0169600 21864333-21865393 intergenetic lncRNA (lincRNA) 1061 52.9689 1
Osa02LNT0479800.1 2 Osa02LNG0479800 21884191-21884480 intergenetic lncRNA (lincRNA) 290 27.24138 1
Osa02LNT0479900.1 2 Osa02LNG0479900 21884191-21884480 intergenetic lncRNA (lincRNA) 290 27.24138 1
Osa02LNT0169800.1 2 Osa02LNG0169800 21981053-21986507 long non-coding(lnc) isoforms of known genes 1540 45.06494 7
Osa02LNT0169900.2 2 Osa02LNG0169900 21986709-21991419 long non-coding(lnc) isoforms of known genes 2525 43.52475 5
Osa02LNT0169900.1 2 Osa02LNG0169900 21986709-21991419 long non-coding(lnc) isoforms of known genes 3885 41.23552 4
Osa02LNT0480000.1 2 Osa02LNG0480000 22004989-22005225 intergenetic lncRNA (lincRNA) 237 39.66245 1
Osa02LNT0170000.1 2 Osa02LNG0170000 22068014-22070683 long non-coding(lnc) isoforms of known genes 1727 48.81297 8
Osa02LNT0145300.1 2 Osa02LNG0145300 2207519-2214908 long non-coding(lnc) isoforms of known genes 4198 47.1415 14
Osa02LNT0170100.2 2 Osa02LNG0170100 22163299-22167479 long non-coding(lnc) isoforms of known genes 1403 50.32074 9
Osa02LNT0170100.1 2 Osa02LNG0170100 22163299-22167479 long non-coding(lnc) isoforms of known genes 1653 48.88082 8
Osa02LNT0170200.1 2 Osa02LNG0170200 22298463-22305296 Antisense lncRNA 2353 42.11645 4
Osa02LNT0170300.1 2 Osa02LNG0170300 22327308-22331805 long non-coding(lnc) isoforms of known genes 2101 53.59353 6
Osa02LNT0170400.1 2 Osa02LNG0170400 22365326-22367317 long non-coding(lnc) isoforms of known genes 1471 53.569 3
Osa02LNT0170500.1 2 Osa02LNG0170500 22436098-22441004 long non-coding(lnc) isoforms of known genes 2243 44.00357 5
Osa02LNT0170600.1 2 Osa02LNG0170600 22514837-22515722 intergenetic lncRNA (lincRNA) 886 51.80587 1
Osa02LNT0480100.1 2 Osa02LNG0480100 22567217-22567487 intergenetic lncRNA (lincRNA) 271 58.30258 1
Osa02LNT0170700.1 2 Osa02LNG0170700 22696563-22697570 sense lncRNA 907 58.21389 2
Osa02LNT0170800.1 2 Osa02LNG0170800 22794835-22795192 intergenetic lncRNA (lincRNA) 358 57.5419 1
Osa02LNT0170900.1 2 Osa02LNG0170900 22810503-22810846 intergenetic lncRNA (lincRNA) 344 59.01163 1
Osa02LNT0171100.1 2 Osa02LNG0171100 22822261-22826449 long non-coding(lnc) isoforms of known genes 2222 51.12511 13
Osa02LNT0171000.1 2 Osa02LNG0171000 22835781-22838334 long non-coding(lnc) isoforms of known genes 1422 50.14065 4
Osa02LNT0171200.1 2 Osa02LNG0171200 23069835-23072526 long non-coding(lnc) isoforms of known genes 1639 51.18975 3
Osa02LNT0171400.1 2 Osa02LNG0171400 23083251-23086431 sense lncRNA 1933 49.81893 2
Osa02LNT0480200.1 2 Osa02LNG0480200 23088730-23088934 intergenetic lncRNA (lincRNA) 205 25.36585 1
Osa02LNT0171300.1 2 Osa02LNG0171300 23092451-23093307 intergenetic lncRNA (lincRNA) 857 48.07468 1
Osa02LNT0171500.1 2 Osa02LNG0171500 23152884-23154628 sense lncRNA 1598 69.77472 2
Osa02LNT0480300.1 2 Osa02LNG0480300 23170591-23170792 intergenetic lncRNA (lincRNA) 202 41.08911 1
Osa02LNT0480400.1 2 Osa02LNG0480400 23170591-23170792 intergenetic lncRNA (lincRNA) 202 41.08911 1
Osa02LNT0171600.1 2 Osa02LNG0171600 23183131-23186462 long non-coding(lnc) isoforms of known genes 2962 47.8393 5
Osa02LNT0171700.1 2 Osa02LNG0171700 23241660-23244453 sense lncRNA 1091 58.75344 3
Osa02LNT0171800.1 2 Osa02LNG0171800 23446736-23448400 intergenetic lncRNA (lincRNA) 1665 53.87387 1
Osa02LNT0480500.1 2 Osa02LNG0480500 23504630-23504849 intergenetic lncRNA (lincRNA) 220 27.27273 1
Osa02LNT0171900.1 2 Osa02LNG0171900 23514645-23517563 sense lncRNA 1417 49.753 3
Osa02LNT0480600.1 2 Osa02LNG0480600 23520419-23520640 intergenetic lncRNA (lincRNA) 222 57.65766 1
Osa02LNT0172000.1 2 Osa02LNG0172000 23549275-23554380 long non-coding(lnc) isoforms of known genes 3166 51.23184 9
Osa02LNT0172100.1 2 Osa02LNG0172100 23656581-23657557 long non-coding(lnc) isoforms of known genes 714 42.57703 4
Osa02LNT0172200.1 2 Osa02LNG0172200 23723124-23729102 long non-coding(lnc) isoforms of known genes 1235 43.96761 4
Osa02LNT0172300.1 2 Osa02LNG0172300 23749148-23753231 long non-coding(lnc) isoforms of known genes 1995 50.12531 13
Osa02LNT0172400.2 2 Osa02LNG0172400 23760607-23765974 long non-coding(lnc) isoforms of known genes 2046 42.37537 10
Osa02LNT0172400.1 2 Osa02LNG0172400 23760607-23765974 long non-coding(lnc) isoforms of known genes 2075 43.51807 11
Osa02LNT0172500.1 2 Osa02LNG0172500 23776284-23782293 long non-coding(lnc) isoforms of known genes 2138 53.92891 11
Osa02LNT0172600.1 2 Osa02LNG0172600 23855880-23858516 long non-coding(lnc) isoforms of known genes 1356 47.71386 5
Osa02LNT0172600.2 2 Osa02LNG0172600 23855880-23858516 long non-coding(lnc) isoforms of known genes 1253 49.24182 6
Osa02LNT0172700.1 2 Osa02LNG0172700 23866527-23874848 long non-coding(lnc) isoforms of known genes 2817 45.5804 15
Osa02LNT0172800.2 2 Osa02LNG0172800 23876535-23881304 long non-coding(lnc) isoforms of known genes 1479 47.66734 12
Osa02LNT0172800.1 2 Osa02LNG0172800 23876535-23881304 long non-coding(lnc) isoforms of known genes 1464 47.60929 12
Osa02LNT0480700.1 2 Osa02LNG0480700 23962476-23962687 intergenetic lncRNA (lincRNA) 212 25.0 1
Osa02LNT0172900.1 2 Osa02LNG0172900 23992294-23996356 long non-coding(lnc) isoforms of known genes 1260 53.4127 5