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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0457300.1 1 Osa01LNG0457300 16230274-16230548 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa01LNT0457200.1 1 Osa01LNG0457200 16230274-16230548 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa01LNT0457500.1 1 Osa01LNG0457500 16231371-16231645 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa01LNT0457400.1 1 Osa01LNG0457400 16231371-16231645 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa01LNT0019600.1 1 Osa01LNG0019600 16232158-16234453 long non-coding(lnc) isoforms of known genes 1735 47.08934 3
Osa01LNT0019600.2 1 Osa01LNG0019600 16232158-16234453 long non-coding(lnc) isoforms of known genes 1336 50.1497 4
Osa01LNT0019600.3 1 Osa01LNG0019600 16232158-16234453 sense lncRNA 2217 43.93324 2
Osa01LNT0019700.1 1 Osa01LNG0019700 16457055-16457330 intergenetic lncRNA (lincRNA) 276 52.89855 1
Osa01LNT0019800.1 1 Osa01LNG0019800 16663408-16664018 intronic lncRNA 554 33.93502 2
Osa01LNT0457600.1 1 Osa01LNG0457600 16704312-16704566 intergenetic lncRNA (lincRNA) 255 25.09804 1
Osa01LNT0457700.1 1 Osa01LNG0457700 16704312-16704566 intergenetic lncRNA (lincRNA) 255 25.09804 1
Osa01LNT0019900.1 1 Osa01LNG0019900 16706252-16709603 long non-coding(lnc) isoforms of known genes 1298 54.6225 4
Osa01LNT0001500.1 1 Osa01LNG0001500 1673503-1677066 long non-coding(lnc) isoforms of known genes 3057 45.79653 5
Osa01LNT0020100.2 1 Osa01LNG0020100 17066982-17070785 long non-coding(lnc) isoforms of known genes 1758 50.11377 4
Osa01LNT0020100.1 1 Osa01LNG0020100 17066982-17070785 long non-coding(lnc) isoforms of known genes 1754 50.05701 4
Osa01LNT0020000.2 1 Osa01LNG0020000 17075829-17077551 intergenetic lncRNA (lincRNA) 525 44.38095 3
Osa01LNT0020000.1 1 Osa01LNG0020000 17075829-17077551 intergenetic lncRNA (lincRNA) 579 44.55959 4
Osa01LNT0020200.1 1 Osa01LNG0020200 17210257-17218276 long non-coding(lnc) isoforms of known genes 2299 46.71596 14
Osa01LNT0020300.1 1 Osa01LNG0020300 17266185-17274780 long non-coding(lnc) isoforms of known genes 4406 46.77712 3
Osa01LNT0020400.1 1 Osa01LNG0020400 17454123-17464765 long non-coding(lnc) isoforms of known genes 4096 38.08594 11
Osa01LNT0020400.2 1 Osa01LNG0020400 17454123-17464765 long non-coding(lnc) isoforms of known genes 2452 44.57586 12
Osa01LNT0457800.1 1 Osa01LNG0457800 17500588-17500872 intergenetic lncRNA (lincRNA) 285 40.70175 1
Osa01LNT0020500.1 1 Osa01LNG0020500 17681921-17682194 Antisense lncRNA 274 47.08029 1
Osa01LNT0457900.1 1 Osa01LNG0457900 17722103-17722378 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa01LNT0458000.1 1 Osa01LNG0458000 17722103-17722378 intergenetic lncRNA (lincRNA) 276 26.44928 1