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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0173000.1 2 Osa02LNG0173000 24021751-24022634 intergenetic lncRNA (lincRNA) 884 45.9276 1
Osa02LNT0173100.1 2 Osa02LNG0173100 24048829-24058147 long non-coding(lnc) isoforms of known genes 2269 49.88982 11
Osa02LNT0173200.1 2 Osa02LNG0173200 24063225-24066462 long non-coding(lnc) isoforms of known genes 888 50.56306 5
Osa02LNT0173300.1 2 Osa02LNG0173300 24068401-24074731 long non-coding(lnc) isoforms of known genes 3304 44.21913 8
Osa02LNT0173400.1 2 Osa02LNG0173400 24100174-24103481 long non-coding(lnc) isoforms of known genes 1418 48.58956 7
Osa02LNT0173500.1 2 Osa02LNG0173500 24139922-24146717 long non-coding(lnc) isoforms of known genes 3266 46.44825 14
Osa02LNT0173700.1 2 Osa02LNG0173700 24168671-24170401 long non-coding(lnc) isoforms of known genes 1339 33.98058 2
Osa02LNT0173600.1 2 Osa02LNG0173600 24178420-24188075 long non-coding(lnc) isoforms of known genes 5411 48.06875 10
Osa02LNT0173800.1 2 Osa02LNG0173800 24474851-24477353 intergenetic lncRNA (lincRNA) 370 55.94595 3
Osa02LNT0173900.1 2 Osa02LNG0173900 24482937-24487512 long non-coding(lnc) isoforms of known genes 2514 44.39141 8
Osa02LNT0174000.1 2 Osa02LNG0174000 24488773-24501969 long non-coding(lnc) isoforms of known genes 4782 44.98118 21
Osa02LNT0174100.1 2 Osa02LNG0174100 24531302-24540066 long non-coding(lnc) isoforms of known genes 3211 46.21613 16
Osa02LNT0174200.1 2 Osa02LNG0174200 24773729-24775040 sense lncRNA 1212 45.13201 2
Osa02LNT0174300.1 2 Osa02LNG0174300 24783226-24786537 long non-coding(lnc) isoforms of known genes 1421 51.51302 7
Osa02LNT0480900.1 2 Osa02LNG0480900 24799548-24799806 intergenetic lncRNA (lincRNA) 259 30.50193 1
Osa02LNT0480800.1 2 Osa02LNG0480800 24799548-24799806 intergenetic lncRNA (lincRNA) 259 30.50193 1
Osa02LNT0174400.1 2 Osa02LNG0174400 24848196-24860061 long non-coding(lnc) isoforms of known genes 2133 46.17909 14
Osa02LNT0145400.1 2 Osa02LNG0145400 2492880-2493327 intergenetic lncRNA (lincRNA) 448 34.15179 1
Osa02LNT0174500.1 2 Osa02LNG0174500 25074258-25076457 long non-coding(lnc) isoforms of known genes 1750 49.02857 5
Osa02LNT0174600.1 2 Osa02LNG0174600 25148836-25151156 long non-coding(lnc) isoforms of known genes 558 49.64158 4
Osa02LNT0145500.1 2 Osa02LNG0145500 2516879-2519232 long non-coding(lnc) isoforms of known genes 367 50.40872 2
Osa02LNT0174700.1 2 Osa02LNG0174700 25273646-25284054 long non-coding(lnc) isoforms of known genes 3786 43.89857 17
Osa02LNT0175000.1 2 Osa02LNG0175000 25348276-25351671 long non-coding(lnc) isoforms of known genes 3092 43.20828 4
Osa02LNT0174800.1 2 Osa02LNG0174800 25354024-25355727 intergenetic lncRNA (lincRNA) 729 59.80796 2
Osa02LNT0174900.1 2 Osa02LNG0174900 25373430-25374516 intergenetic lncRNA (lincRNA) 672 49.85119 2
Osa02LNT0175200.1 2 Osa02LNG0175200 25379691-25392806 long non-coding(lnc) isoforms of known genes 6671 42.94708 17
Osa02LNT0175100.1 2 Osa02LNG0175100 25410351-25411024 intergenetic lncRNA (lincRNA) 579 44.7323 2
Osa02LNT0175300.1 2 Osa02LNG0175300 25569292-25574848 long non-coding(lnc) isoforms of known genes 3192 42.95113 8
Osa02LNT0481000.1 2 Osa02LNG0481000 25599631-25599887 intergenetic lncRNA (lincRNA) 257 26.84825 1
Osa02LNT0481100.1 2 Osa02LNG0481100 25599631-25599887 intergenetic lncRNA (lincRNA) 257 26.84825 1
Osa02LNT0145600.1 2 Osa02LNG0145600 2572285-2572748 intergenetic lncRNA (lincRNA) 464 65.08621 1
Osa02LNT0145700.1 2 Osa02LNG0145700 2572285-2576410 Antisense lncRNA 538 66.35688 2
Osa02LNT0175400.1 2 Osa02LNG0175400 25728102-25728325 Antisense lncRNA 224 34.82143 1
Osa02LNT0175500.1 2 Osa02LNG0175500 25739387-25741260 long non-coding(lnc) isoforms of known genes 1162 47.07401 5
Osa02LNT0175500.2 2 Osa02LNG0175500 25739387-25741260 long non-coding(lnc) isoforms of known genes 1080 50.64815 6
Osa02LNT0175600.1 2 Osa02LNG0175600 25797297-25800025 sense lncRNA 1045 49.95215 4
Osa02LNT0175700.1 2 Osa02LNG0175700 25925896-25926323 intergenetic lncRNA (lincRNA) 428 35.04673 1
Osa02LNT0145800.1 2 Osa02LNG0145800 2593746-2598284 long non-coding(lnc) isoforms of known genes 2374 44.39764 14
Osa02LNT0175800.3 2 Osa02LNG0175800 25946487-25952272 long non-coding(lnc) isoforms of known genes 5917 40.98361 7
Osa02LNT0175800.4 2 Osa02LNG0175800 25946487-25952272 long non-coding(lnc) isoforms of known genes 3860 45.67358 9
Osa02LNT0175800.2 2 Osa02LNG0175800 25946487-25952272 long non-coding(lnc) isoforms of known genes 2825 47.39823 8
Osa02LNT0175800.1 2 Osa02LNG0175800 25946487-25952272 long non-coding(lnc) isoforms of known genes 2561 46.15385 9
Osa02LNT0175800.5 2 Osa02LNG0175800 25946487-25952272 long non-coding(lnc) isoforms of known genes 3976 46.55433 9
Osa02LNT0145900.1 2 Osa02LNG0145900 2599191-2604020 long non-coding(lnc) isoforms of known genes 4212 50.26116 2
Osa02LNT0145900.2 2 Osa02LNG0145900 2599191-2604020 long non-coding(lnc) isoforms of known genes 4121 50.61878 3
Osa02LNT0175900.1 2 Osa02LNG0175900 26119616-26120394 intergenetic lncRNA (lincRNA) 779 56.86778 1
Osa02LNT0176000.1 2 Osa02LNG0176000 26208987-26213005 long non-coding(lnc) isoforms of known genes 3307 45.44905 3
Osa02LNT0176100.1 2 Osa02LNG0176100 26243702-26246193 long non-coding(lnc) isoforms of known genes 1154 52.07972 6
Osa02LNT0176200.1 2 Osa02LNG0176200 26308605-26316069 long non-coding(lnc) isoforms of known genes 1179 44.10517 9
Osa02LNT0176300.1 2 Osa02LNG0176300 26396736-26403263 long non-coding(lnc) isoforms of known genes 3705 45.07422 12