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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0539700.1 11 Osa11LNG0539700 17282089-17282293 intergenetic lncRNA (lincRNA) 205 37.07317 1
Osa11LNT0100000.1 11 Osa11LNG0100000 17289200-17296384 sense lncRNA 1112 48.92086 5
Osa11LNT0100100.1 11 Osa11LNG0100100 17564453-17565175 intergenetic lncRNA (lincRNA) 723 54.08022 1
Osa11LNT0100200.1 11 Osa11LNG0100200 17616598-17620429 long non-coding(lnc) isoforms of known genes 1940 62.83505 12
Osa11LNT0539800.1 11 Osa11LNG0539800 17707668-17707893 intergenetic lncRNA (lincRNA) 226 49.55752 1
Osa11LNT0540000.1 11 Osa11LNG0540000 17743075-17743349 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0539900.1 11 Osa11LNG0539900 17743075-17743349 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0085100.1 11 Osa11LNG0085100 1777335-1781010 long non-coding(lnc) isoforms of known genes 3063 43.71531 2
Osa11LNT0085200.1 11 Osa11LNG0085200 1781776-1786597 long non-coding(lnc) isoforms of known genes 900 53.66667 6
Osa11LNT0540100.1 11 Osa11LNG0540100 17890702-17890939 intergenetic lncRNA (lincRNA) 238 46.21849 1
Osa11LNT0100300.1 11 Osa11LNG0100300 17983538-17984324 intergenetic lncRNA (lincRNA) 787 51.46125 1
Osa11LNT0100400.1 11 Osa11LNG0100400 18156237-18157526 long non-coding(lnc) isoforms of known genes 811 50.06165 2
Osa11LNT0100500.1 11 Osa11LNG0100500 18337730-18342822 long non-coding(lnc) isoforms of known genes 1965 46.41221 10
Osa11LNT0100600.2 11 Osa11LNG0100600 18391513-18399533 intergenetic lncRNA (lincRNA) 5293 43.00019 4
Osa11LNT0100600.1 11 Osa11LNG0100600 18391513-18399533 intergenetic lncRNA (lincRNA) 5507 44.67042 5
Osa11LNT0540200.1 11 Osa11LNG0540200 18421880-18422083 intergenetic lncRNA (lincRNA) 204 22.05882 1
Osa11LNT0085400.2 11 Osa11LNG0085400 1842242-1847877 long non-coding(lnc) isoforms of known genes 1651 57.48031 3
Osa11LNT0085400.1 11 Osa11LNG0085400 1842242-1847877 long non-coding(lnc) isoforms of known genes 1525 57.11475 3
Osa11LNT0100800.1 11 Osa11LNG0100800 18531654-18541502 long non-coding(lnc) isoforms of known genes 3005 41.93012 21
Osa11LNT0100700.2 11 Osa11LNG0100700 18543987-18550593 long non-coding(lnc) isoforms of known genes 2380 45.54622 8
Osa11LNT0100700.1 11 Osa11LNG0100700 18543987-18550593 long non-coding(lnc) isoforms of known genes 2375 45.55789 8
Osa11LNT0101100.4 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5348 43.56769 35
Osa11LNT0101100.6 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 2894 42.15619 15
Osa11LNT0101100.1 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 2114 44.56008 17
Osa11LNT0101100.7 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5209 43.88558 37