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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0103100.2 11 Osa11LNG0103100 20109599-20116019 long non-coding(lnc) isoforms of known genes 2435 49.69199 14
Osa11LNT0085700.1 11 Osa11LNG0085700 2015298-2018115 long non-coding(lnc) isoforms of known genes 1313 54.30312 4
Osa11LNT0103300.1 11 Osa11LNG0103300 20182477-20187059 long non-coding(lnc) isoforms of known genes 1982 51.36226 2
Osa11LNT0103400.1 11 Osa11LNG0103400 20278394-20281173 sense lncRNA 1848 35.7684 3
Osa11LNT0103500.1 11 Osa11LNG0103500 20315329-20317394 long non-coding(lnc) isoforms of known genes 854 57.02576 6
Osa11LNT0103600.2 11 Osa11LNG0103600 20369180-20372223 long non-coding(lnc) isoforms of known genes 1680 48.33333 8
Osa11LNT0103600.1 11 Osa11LNG0103600 20369180-20372223 long non-coding(lnc) isoforms of known genes 1399 51.10793 9
Osa11LNT0103700.2 11 Osa11LNG0103700 20390259-20392211 long non-coding(lnc) isoforms of known genes 1737 61.94588 2
Osa11LNT0103700.1 11 Osa11LNG0103700 20390259-20392211 long non-coding(lnc) isoforms of known genes 1794 61.03679 2
Osa11LNT0103800.1 11 Osa11LNG0103800 20415216-20419183 long non-coding(lnc) isoforms of known genes 1883 47.68986 12
Osa11LNT0103900.1 11 Osa11LNG0103900 20420039-20423550 long non-coding(lnc) isoforms of known genes 1067 48.07873 9
Osa11LNT0104000.1 11 Osa11LNG0104000 20482703-20488020 long non-coding(lnc) isoforms of known genes 1489 48.82471 8
Osa11LNT0104100.1 11 Osa11LNG0104100 20533192-20535516 long non-coding(lnc) isoforms of known genes 1904 42.4895 6
Osa11LNT0104200.1 11 Osa11LNG0104200 20572147-20577380 long non-coding(lnc) isoforms of known genes 2227 52.67176 14
Osa11LNT0085800.1 11 Osa11LNG0085800 2059565-2063380 long non-coding(lnc) isoforms of known genes 2654 56.02864 8
Osa11LNT0085900.2 11 Osa11LNG0085900 2063999-2066533 sense lncRNA 1356 56.12094 3
Osa11LNT0085900.1 11 Osa11LNG0085900 2063999-2066533 sense lncRNA 1281 57.45511 2
Osa11LNT0541700.1 11 Osa11LNG0541700 20864353-20864597 intergenetic lncRNA (lincRNA) 245 28.57143 1
Osa11LNT0541800.1 11 Osa11LNG0541800 20864353-20864597 intergenetic lncRNA (lincRNA) 245 28.57143 1
Osa11LNT0542000.1 11 Osa11LNG0542000 20864664-20864936 intergenetic lncRNA (lincRNA) 273 26.37363 1
Osa11LNT0541900.1 11 Osa11LNG0541900 20864664-20864936 intergenetic lncRNA (lincRNA) 273 26.37363 1
Osa11LNT0542100.1 11 Osa11LNG0542100 20865148-20865381 intergenetic lncRNA (lincRNA) 234 41.88034 1
Osa11LNT0086000.1 11 Osa11LNG0086000 2087123-2094502 long non-coding(lnc) isoforms of known genes 1985 46.85139 13
Osa11LNT0086100.1 11 Osa11LNG0086100 2089899-2090120 intergenetic lncRNA (lincRNA) 222 62.61261 1
Osa11LNT0104300.2 11 Osa11LNG0104300 21050994-21056185 long non-coding(lnc) isoforms of known genes 1478 46.88769 7