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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0151700.1 2 Osa02LNG0151700 5816433-5818937 intergenetic lncRNA (lincRNA) 760 54.34211 2
Osa02LNT0151800.1 2 Osa02LNG0151800 5910515-5912009 sense lncRNA 387 48.57881 2
Osa02LNT0151900.2 2 Osa02LNG0151900 5912676-5914192 long non-coding(lnc) isoforms of known genes 1306 67.22818 4
Osa02LNT0151900.1 2 Osa02LNG0151900 5912676-5914192 long non-coding(lnc) isoforms of known genes 1360 68.01471 3
Osa02LNT0152000.1 2 Osa02LNG0152000 5964373-5967661 long non-coding(lnc) isoforms of known genes 1458 60.42524 3
Osa02LNT0152100.1 2 Osa02LNG0152100 6014090-6015999 intergenetic lncRNA (lincRNA) 789 46.51458 3
Osa02LNT0152300.2 2 Osa02LNG0152300 6119126-6128455 long non-coding(lnc) isoforms of known genes 2330 41.58798 18
Osa02LNT0152300.1 2 Osa02LNG0152300 6119126-6128455 long non-coding(lnc) isoforms of known genes 2990 42.14047 24
Osa02LNT0152300.3 2 Osa02LNG0152300 6119126-6128455 long non-coding(lnc) isoforms of known genes 2339 41.51347 17
Osa02LNT0152300.4 2 Osa02LNG0152300 6119126-6128455 long non-coding(lnc) isoforms of known genes 3200 44.71875 26
Osa02LNT0152400.1 2 Osa02LNG0152400 6128565-6129212 Antisense lncRNA 267 58.05243 3
Osa02LNT0140400.1 2 Osa02LNG0140400 616208-617444 intergenetic lncRNA (lincRNA) 883 39.8641 4
Osa02LNT0152200.1 2 Osa02LNG0152200 6171980-6173926 intergenetic lncRNA (lincRNA) 712 55.33708 2
Osa02LNT0152600.1 2 Osa02LNG0152600 6207691-6213759 Antisense lncRNA 636 44.96855 2
Osa02LNT0152600.2 2 Osa02LNG0152600 6207691-6213759 intergenetic lncRNA (lincRNA) 535 37.57009 2
Osa02LNT0152500.1 2 Osa02LNG0152500 6219541-6220451 intergenetic lncRNA (lincRNA) 610 44.42623 2
Osa02LNT0152700.1 2 Osa02LNG0152700 6251412-6252359 intergenetic lncRNA (lincRNA) 833 36.37455 2
Osa02LNT0473900.1 2 Osa02LNG0473900 6334731-6334972 intergenetic lncRNA (lincRNA) 242 26.8595 1
Osa02LNT0474100.1 2 Osa02LNG0474100 6335072-6335280 intergenetic lncRNA (lincRNA) 209 24.88038 1
Osa02LNT0474000.1 2 Osa02LNG0474000 6335072-6335280 intergenetic lncRNA (lincRNA) 209 24.88038 1
Osa02LNT0152800.1 2 Osa02LNG0152800 6406068-6415381 intergenetic lncRNA (lincRNA) 579 45.76857 3
Osa02LNT0152800.2 2 Osa02LNG0152800 6406068-6415381 intergenetic lncRNA (lincRNA) 781 44.55826 3
Osa02LNT0152900.3 2 Osa02LNG0152900 6433109-6441682 long non-coding(lnc) isoforms of known genes 3183 51.46089 13
Osa02LNT0152900.2 2 Osa02LNG0152900 6433109-6441682 long non-coding(lnc) isoforms of known genes 3653 49.35669 12
Osa02LNT0152900.1 2 Osa02LNG0152900 6433109-6441682 long non-coding(lnc) isoforms of known genes 3127 51.48705 12
Osa02LNT0153000.1 2 Osa02LNG0153000 6450649-6451371 intronic lncRNA 723 59.61272 1
Osa02LNT0153100.1 2 Osa02LNG0153100 6495518-6495748 intronic lncRNA 231 42.85714 1
Osa02LNT0153200.1 2 Osa02LNG0153200 6529761-6532965 long non-coding(lnc) isoforms of known genes 1542 46.49805 4
Osa02LNT0153400.2 2 Osa02LNG0153400 6533712-6538109 sense lncRNA 1844 49.89154 4
Osa02LNT0153400.1 2 Osa02LNG0153400 6533712-6538109 sense lncRNA 4069 41.5827 4
Osa02LNT0153300.1 2 Osa02LNG0153300 6543707-6543983 intergenetic lncRNA (lincRNA) 277 56.6787 1
Osa02LNT0153500.1 2 Osa02LNG0153500 6566013-6566731 intergenetic lncRNA (lincRNA) 719 64.39499 1
Osa02LNT0153600.1 2 Osa02LNG0153600 6668862-6672904 long non-coding(lnc) isoforms of known genes 1578 46.4512 10
Osa02LNT0153700.1 2 Osa02LNG0153700 6680307-6682999 long non-coding(lnc) isoforms of known genes 2192 42.83759 2
Osa02LNT0153800.1 2 Osa02LNG0153800 6711502-6716673 intergenetic lncRNA (lincRNA) 784 49.23469 4
Osa02LNT0153900.1 2 Osa02LNG0153900 6771469-6779351 Antisense lncRNA 455 62.85714 2
Osa02LNT0154000.1 2 Osa02LNG0154000 6784377-6788332 long non-coding(lnc) isoforms of known genes 1668 51.19904 8
Osa02LNT0154100.1 2 Osa02LNG0154100 7012512-7017442 long non-coding(lnc) isoforms of known genes 1137 54.26561 3
Osa02LNT0154200.1 2 Osa02LNG0154200 7032348-7034859 long non-coding(lnc) isoforms of known genes 1101 55.1317 4
Osa02LNT0474200.1 2 Osa02LNG0474200 7140018-7140234 intergenetic lncRNA (lincRNA) 217 26.26728 1
Osa02LNT0474400.1 2 Osa02LNG0474400 7214168-7214418 intergenetic lncRNA (lincRNA) 251 27.88845 1
Osa02LNT0474300.1 2 Osa02LNG0474300 7214168-7214418 intergenetic lncRNA (lincRNA) 251 27.88845 1
Osa02LNT0474500.1 2 Osa02LNG0474500 7261433-7261670 intergenetic lncRNA (lincRNA) 238 28.9916 1
Osa02LNT0154300.2 2 Osa02LNG0154300 7312011-7314657 long non-coding(lnc) isoforms of known genes 515 60.97087 3
Osa02LNT0154300.1 2 Osa02LNG0154300 7312011-7314657 long non-coding(lnc) isoforms of known genes 484 63.42975 3
Osa02LNT0154400.1 2 Osa02LNG0154400 7323916-7325166 sense lncRNA 858 46.2704 3
Osa02LNT0140600.1 2 Osa02LNG0140600 748721-759539 long non-coding(lnc) isoforms of known genes 7261 47.34885 14
Osa02LNT0154500.1 2 Osa02LNG0154500 7630948-7635189 long non-coding(lnc) isoforms of known genes 1533 47.61905 8
Osa02LNT0154600.1 2 Osa02LNG0154600 7796989-7797242 intergenetic lncRNA (lincRNA) 254 53.14961 1
Osa02LNT0474600.1 2 Osa02LNG0474600 7973039-7973283 intergenetic lncRNA (lincRNA) 245 25.30612 1