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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0105200.1 11 Osa11LNG0105200 22267505-22271370 long non-coding(lnc) isoforms of known genes 2244 43.62745 10
Osa11LNT0105300.1 11 Osa11LNG0105300 22268730-22271209 long non-coding(lnc) isoforms of known genes 2318 42.49353 3
Osa11LNT0105100.1 11 Osa11LNG0105100 22272891-22281786 long non-coding(lnc) isoforms of known genes 4271 43.19831 19
Osa11LNT0543400.1 11 Osa11LNG0543400 22415592-22415801 intergenetic lncRNA (lincRNA) 210 40.47619 1
Osa11LNT0105400.1 11 Osa11LNG0105400 22439360-22445813 sense lncRNA 433 46.88222 2
Osa11LNT0105500.1 11 Osa11LNG0105500 22449578-22451319 intergenetic lncRNA (lincRNA) 282 47.51773 2
Osa11LNT0086500.1 11 Osa11LNG0086500 2247726-2256211 long non-coding(lnc) isoforms of known genes 6574 47.14025 10
Osa11LNT0105600.1 11 Osa11LNG0105600 22514191-22518062 long non-coding(lnc) isoforms of known genes 1791 46.06365 7
Osa11LNT0105700.1 11 Osa11LNG0105700 22523670-22529610 long non-coding(lnc) isoforms of known genes 2668 52.88606 9
Osa11LNT0086600.1 11 Osa11LNG0086600 2257210-2261394 long non-coding(lnc) isoforms of known genes 2983 45.55816 5
Osa11LNT0086600.2 11 Osa11LNG0086600 2257210-2261394 long non-coding(lnc) isoforms of known genes 1808 50.16593 6
Osa11LNT0105800.1 11 Osa11LNG0105800 22645464-22647342 sense lncRNA 1708 54.03981 2
Osa11LNT0105900.1 11 Osa11LNG0105900 22792018-22792363 intergenetic lncRNA (lincRNA) 346 44.21965 1
Osa11LNT0106000.1 11 Osa11LNG0106000 23225234-23226910 long non-coding(lnc) isoforms of known genes 1010 52.37624 3
Osa11LNT0106100.1 11 Osa11LNG0106100 23342381-23343067 intergenetic lncRNA (lincRNA) 687 42.35808 1
Osa11LNT0106200.1 11 Osa11LNG0106200 23375120-23375987 Antisense lncRNA 497 64.18511 2
Osa11LNT0106300.1 11 Osa11LNG0106300 23553209-23558619 long non-coding(lnc) isoforms of known genes 1249 43.63491 7
Osa11LNT0543500.1 11 Osa11LNG0543500 23562093-23562346 intergenetic lncRNA (lincRNA) 254 26.77165 1
Osa11LNT0086700.1 11 Osa11LNG0086700 2363882-2369635 sense lncRNA 494 61.53846 2
Osa11LNT0106400.1 11 Osa11LNG0106400 23661546-23664532 long non-coding(lnc) isoforms of known genes 1472 43.20652 5
Osa11LNT0106500.1 11 Osa11LNG0106500 23930753-23932107 intergenetic lncRNA (lincRNA) 1355 52.10332 1
Osa11LNT0106600.1 11 Osa11LNG0106600 24071432-24071879 intergenetic lncRNA (lincRNA) 448 42.85714 1
Osa11LNT0106700.1 11 Osa11LNG0106700 24071931-24076332 intergenetic lncRNA (lincRNA) 1510 45.23179 5
Osa11LNT0106800.1 11 Osa11LNG0106800 24077702-24082156 long non-coding(lnc) isoforms of known genes 3648 45.39474 3
Osa11LNT0106900.1 11 Osa11LNG0106900 24083767-24087622 long non-coding(lnc) isoforms of known genes 1851 45.48892 4