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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0107000.1 11 Osa11LNG0107000 24096003-24100539 long non-coding(lnc) isoforms of known genes 3250 44.70769 4
Osa11LNT0107000.2 11 Osa11LNG0107000 24096003-24100539 long non-coding(lnc) isoforms of known genes 3460 44.24855 3
Osa11LNT0107100.2 11 Osa11LNG0107100 24118821-24120364 Antisense lncRNA 492 52.43902 2
Osa11LNT0107100.1 11 Osa11LNG0107100 24118821-24120364 Antisense lncRNA 232 61.63793 2
Osa11LNT0107200.1 11 Osa11LNG0107200 24170773-24172973 long non-coding(lnc) isoforms of known genes 1240 47.41935 8
Osa11LNT0086800.1 11 Osa11LNG0086800 2418418-2423378 long non-coding(lnc) isoforms of known genes 2813 47.60043 10
Osa11LNT0107300.1 11 Osa11LNG0107300 24338961-24340880 intergenetic lncRNA (lincRNA) 1144 39.07343 2
Osa11LNT0107400.1 11 Osa11LNG0107400 24504576-24507416 Antisense lncRNA 547 41.49909 2
Osa11LNT0107500.1 11 Osa11LNG0107500 24506975-24507416 intergenetic lncRNA (lincRNA) 442 36.42534 1
Osa11LNT0086900.1 11 Osa11LNG0086900 2457760-2460823 long non-coding(lnc) isoforms of known genes 896 45.87054 4
Osa11LNT0543600.1 11 Osa11LNG0543600 24588897-24589141 intergenetic lncRNA (lincRNA) 245 38.77551 1
Osa11LNT0543700.1 11 Osa11LNG0543700 24614091-24614338 intergenetic lncRNA (lincRNA) 248 26.20968 1
Osa11LNT0107600.1 11 Osa11LNG0107600 24733779-24734887 sense lncRNA 814 54.1769 2
Osa11LNT0543800.1 11 Osa11LNG0543800 24821258-24821532 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa11LNT0543900.1 11 Osa11LNG0543900 24821258-24821532 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa11LNT0107800.1 11 Osa11LNG0107800 24847426-24853969 long non-coding(lnc) isoforms of known genes 1090 42.01835 3
Osa11LNT0107900.1 11 Osa11LNG0107900 24849968-24850212 intronic lncRNA 245 23.67347 1
Osa11LNT0108100.1 11 Osa11LNG0108100 24850279-24850552 intronic lncRNA 274 27.37226 1
Osa11LNT0108000.1 11 Osa11LNG0108000 24850279-24850552 intronic lncRNA 274 27.37226 1
Osa11LNT0107700.1 11 Osa11LNG0107700 24892469-24893615 intergenetic lncRNA (lincRNA) 992 46.77419 2
Osa11LNT0108200.1 11 Osa11LNG0108200 24906590-24909148 intergenetic lncRNA (lincRNA) 907 41.01433 2
Osa11LNT0108300.1 11 Osa11LNG0108300 24959561-24960185 intergenetic lncRNA (lincRNA) 625 38.24 1
Osa11LNT0108400.2 11 Osa11LNG0108400 25148742-25153451 long non-coding(lnc) isoforms of known genes 2785 48.1149 10
Osa11LNT0108400.1 11 Osa11LNG0108400 25148742-25153451 long non-coding(lnc) isoforms of known genes 3028 46.89564 9
Osa11LNT0544000.1 11 Osa11LNG0544000 25299716-25299960 intergenetic lncRNA (lincRNA) 245 46.12245 1