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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0458200.1 1 Osa01LNG0458200 17845018-17845292 intergenetic lncRNA (lincRNA) 275 29.81818 1
Osa01LNT0458100.1 1 Osa01LNG0458100 17845018-17845292 intergenetic lncRNA (lincRNA) 275 29.81818 1
Osa01LNT0020600.1 1 Osa01LNG0020600 17959148-17959560 intergenetic lncRNA (lincRNA) 413 60.53269 1
Osa01LNT0001700.1 1 Osa01LNG0001700 1801983-1817601 long non-coding(lnc) isoforms of known genes 3524 53.57548 11
Osa01LNT0020700.1 1 Osa01LNG0020700 18087603-18095451 long non-coding(lnc) isoforms of known genes 1892 53.11839 8
Osa01LNT0020800.1 1 Osa01LNG0020800 18101569-18111525 long non-coding(lnc) isoforms of known genes 1873 53.23011 9
Osa01LNT0020900.1 1 Osa01LNG0020900 18298221-18303977 long non-coding(lnc) isoforms of known genes 2013 55.68803 4
Osa01LNT0458300.1 1 Osa01LNG0458300 18431205-18431409 intergenetic lncRNA (lincRNA) 205 41.95122 1
Osa01LNT0021000.1 1 Osa01LNG0021000 18459160-18463671 sense lncRNA 2861 49.73785 3
Osa01LNT0021000.3 1 Osa01LNG0021000 18459160-18463671 sense lncRNA 2839 49.77105 3
Osa01LNT0021000.2 1 Osa01LNG0021000 18459160-18463671 sense lncRNA 3440 47.5 2
Osa01LNT0021100.1 1 Osa01LNG0021100 18531902-18541385 long non-coding(lnc) isoforms of known genes 4795 40.62565 5
Osa01LNT0021100.2 1 Osa01LNG0021100 18531902-18541385 long non-coding(lnc) isoforms of known genes 4778 40.58183 5
Osa01LNT0021200.1 1 Osa01LNG0021200 18584847-18588817 long non-coding(lnc) isoforms of known genes 2554 44.16601 7
Osa01LNT0021200.2 1 Osa01LNG0021200 18584847-18588817 long non-coding(lnc) isoforms of known genes 2637 43.1551 7
Osa01LNT0021300.1 1 Osa01LNG0021300 18587762-18588817 Antisense lncRNA 492 39.8374 3
Osa01LNT0021300.2 1 Osa01LNG0021300 18587762-18588817 intergenetic lncRNA (lincRNA) 530 34.71698 2
Osa01LNT0021500.1 1 Osa01LNG0021500 18674885-18675997 intergenetic lncRNA (lincRNA) 1004 45.21912 2
Osa01LNT0021400.1 1 Osa01LNG0021400 18684949-18685167 intergenetic lncRNA (lincRNA) 219 54.79452 1
Osa01LNT0458400.1 1 Osa01LNG0458400 18957497-18957722 intergenetic lncRNA (lincRNA) 226 47.78761 1
Osa01LNT0001800.1 1 Osa01LNG0001800 1906717-1908574 sense lncRNA 1454 62.24209 2
Osa01LNT0021600.1 1 Osa01LNG0021600 19106717-19107489 intergenetic lncRNA (lincRNA) 686 57.58017 2
Osa01LNT0021700.1 1 Osa01LNG0021700 19110830-19122402 long non-coding(lnc) isoforms of known genes 4006 48.82676 8
Osa01LNT0021800.1 1 Osa01LNG0021800 19129984-19134017 long non-coding(lnc) isoforms of known genes 1610 52.36025 4
Osa01LNT0021900.1 1 Osa01LNG0021900 19178310-19192331 long non-coding(lnc) isoforms of known genes 3821 46.66318 30