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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0544100.1 11 Osa11LNG0544100 25391205-25391437 intergenetic lncRNA (lincRNA) 233 40.77253 1
Osa11LNT0544200.1 11 Osa11LNG0544200 25470337-25470540 intergenetic lncRNA (lincRNA) 204 26.47059 1
Osa11LNT0544300.1 11 Osa11LNG0544300 25586527-25586732 intergenetic lncRNA (lincRNA) 206 44.66019 1
Osa11LNT0082400.1 11 Osa11LNG0082400 256918-262382 long non-coding(lnc) isoforms of known genes 3439 47.28119 10
Osa11LNT0108500.1 11 Osa11LNG0108500 25775838-25779956 long non-coding(lnc) isoforms of known genes 2900 45.37931 12
Osa11LNT0108500.2 11 Osa11LNG0108500 25775838-25779956 long non-coding(lnc) isoforms of known genes 2881 45.43561 12
Osa11LNT0108600.1 11 Osa11LNG0108600 25806239-25810387 long non-coding(lnc) isoforms of known genes 1436 41.92201 8
Osa11LNT0544400.1 11 Osa11LNG0544400 25874873-25875136 intergenetic lncRNA (lincRNA) 264 26.13636 1
Osa11LNT0544500.1 11 Osa11LNG0544500 25874873-25875136 intergenetic lncRNA (lincRNA) 264 26.13636 1
Osa11LNT0108700.1 11 Osa11LNG0108700 25966635-25968183 intergenetic lncRNA (lincRNA) 554 41.51625 3
Osa11LNT0087000.1 11 Osa11LNG0087000 2605752-2614119 long non-coding(lnc) isoforms of known genes 5176 42.69706 13
Osa11LNT0108800.1 11 Osa11LNG0108800 26233585-26234264 intergenetic lncRNA (lincRNA) 680 71.32353 1
Osa11LNT0082500.2 11 Osa11LNG0082500 262623-264493 long non-coding(lnc) isoforms of known genes 1047 47.56447 5
Osa11LNT0082500.1 11 Osa11LNG0082500 262623-264493 long non-coding(lnc) isoforms of known genes 1491 46.00939 4
Osa11LNT0108900.1 11 Osa11LNG0108900 26276499-26279705 long non-coding(lnc) isoforms of known genes 2181 45.52957 3
Osa11LNT0109000.1 11 Osa11LNG0109000 26310875-26312789 long non-coding(lnc) isoforms of known genes 1015 51.52709 4
Osa11LNT0109100.1 11 Osa11LNG0109100 26317492-26318016 Antisense lncRNA 237 59.49367 3
Osa11LNT0544600.1 11 Osa11LNG0544600 26444941-26445160 intergenetic lncRNA (lincRNA) 220 45.0 1
Osa11LNT0109200.1 11 Osa11LNG0109200 26468486-26473246 long non-coding(lnc) isoforms of known genes 1802 47.78024 7
Osa11LNT0544700.1 11 Osa11LNG0544700 26486453-26486727 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa11LNT0109300.1 11 Osa11LNG0109300 26524975-26530974 long non-coding(lnc) isoforms of known genes 5204 44.63874 2
Osa11LNT0109400.1 11 Osa11LNG0109400 26533899-26537138 long non-coding(lnc) isoforms of known genes 2487 42.17933 4
Osa11LNT0109500.1 11 Osa11LNG0109500 26952894-26960501 sense lncRNA 3172 45.30265 2
Osa11LNT0544900.1 11 Osa11LNG0544900 27034288-27034543 intergenetic lncRNA (lincRNA) 256 29.29688 1
Osa11LNT0544800.1 11 Osa11LNG0544800 27034288-27034543 intergenetic lncRNA (lincRNA) 256 29.29688 1