\
RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

filter

Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0216400.1 3 Osa03LNG0216400 15131859-15132882 intergenetic lncRNA (lincRNA) 1024 59.76562 1
Osa03LNT0465700.1 3 Osa03LNG0465700 15133390-15133663 intergenetic lncRNA (lincRNA) 274 26.64234 1
Osa03LNT0465800.1 3 Osa03LNG0465800 15133390-15133663 intergenetic lncRNA (lincRNA) 274 26.64234 1
Osa03LNT0194800.2 3 Osa03LNG0194800 1515167-1518909 long non-coding(lnc) isoforms of known genes 1429 44.29671 14
Osa03LNT0194800.1 3 Osa03LNG0194800 1515167-1518909 long non-coding(lnc) isoforms of known genes 1351 44.55959 14
Osa03LNT0465900.1 3 Osa03LNG0465900 15159219-15159493 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa03LNT0466000.1 3 Osa03LNG0466000 15159219-15159493 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa03LNT0216500.1 3 Osa03LNG0216500 15214303-15219070 long non-coding(lnc) isoforms of known genes 2838 47.35729 7
Osa03LNT0194700.1 3 Osa03LNG0194700 1525222-1527076 long non-coding(lnc) isoforms of known genes 555 46.30631 3
Osa03LNT0466200.1 3 Osa03LNG0466200 15288587-15288830 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa03LNT0466100.1 3 Osa03LNG0466100 15288587-15288830 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa03LNT0466300.1 3 Osa03LNG0466300 15288897-15289172 intergenetic lncRNA (lincRNA) 276 24.63768 1
Osa03LNT0466400.1 3 Osa03LNG0466400 15288897-15289172 intergenetic lncRNA (lincRNA) 276 24.63768 1
Osa03LNT0216600.1 3 Osa03LNG0216600 15453264-15457559 long non-coding(lnc) isoforms of known genes 1708 47.01405 3
Osa03LNT0216700.1 3 Osa03LNG0216700 15479890-15481667 long non-coding(lnc) isoforms of known genes 1516 38.91821 2
Osa03LNT0216800.1 3 Osa03LNG0216800 15658869-15661383 long non-coding(lnc) isoforms of known genes 1402 51.42653 7
Osa03LNT0194900.1 3 Osa03LNG0194900 1567984-1575496 long non-coding(lnc) isoforms of known genes 2480 46.89516 20
Osa03LNT0216900.1 3 Osa03LNG0216900 15685589-15689226 long non-coding(lnc) isoforms of known genes 2695 49.12801 4
Osa03LNT0217000.1 3 Osa03LNG0217000 15752795-15756106 sense lncRNA 1813 59.95587 2
Osa03LNT0195100.1 3 Osa03LNG0195100 1582178-1596130 long non-coding(lnc) isoforms of known genes 5457 40.55342 33
Osa03LNT0217100.1 3 Osa03LNG0217100 15967010-15969934 long non-coding(lnc) isoforms of known genes 794 36.27204 3
Osa03LNT0217200.2 3 Osa03LNG0217200 15968994-15970303 sense lncRNA 1094 62.88848 3
Osa03LNT0217200.1 3 Osa03LNG0217200 15968994-15970303 sense lncRNA 1204 61.37874 2
Osa03LNT0217300.2 3 Osa03LNG0217300 15969985-15970549 Antisense lncRNA 288 43.05556 3
Osa03LNT0217300.1 3 Osa03LNG0217300 15969985-15970549 Antisense lncRNA 481 39.29314 2
Osa03LNT0217400.1 3 Osa03LNG0217400 16024525-16026141 sense lncRNA 1177 59.21835 3
Osa03LNT0217400.2 3 Osa03LNG0217400 16024525-16026141 sense lncRNA 1168 59.33219 3
Osa03LNT0217600.1 3 Osa03LNG0217600 16072911-16078822 long non-coding(lnc) isoforms of known genes 2659 46.97255 16
Osa03LNT0217500.1 3 Osa03LNG0217500 16089258-16089669 intergenetic lncRNA (lincRNA) 412 56.31068 1
Osa03LNT0217700.1 3 Osa03LNG0217700 16163346-16164343 intergenetic lncRNA (lincRNA) 998 49.1984 1
Osa03LNT0466500.1 3 Osa03LNG0466500 16237791-16238043 intergenetic lncRNA (lincRNA) 253 52.96443 1
Osa03LNT0195000.1 3 Osa03LNG0195000 1630123-1631834 long non-coding(lnc) isoforms of known genes 1442 62.69071 4
Osa03LNT0217900.1 3 Osa03LNG0217900 16301377-16307632 long non-coding(lnc) isoforms of known genes 2907 51.73719 15
Osa03LNT0217800.1 3 Osa03LNG0217800 16372217-16378567 intergenetic lncRNA (lincRNA) 1753 44.38106 13
Osa03LNT0218000.1 3 Osa03LNG0218000 16383596-16386794 long non-coding(lnc) isoforms of known genes 1539 48.79792 5
Osa03LNT0195200.1 3 Osa03LNG0195200 1653183-1661566 long non-coding(lnc) isoforms of known genes 3242 45.52745 24
Osa03LNT0195300.1 3 Osa03LNG0195300 1667909-1673176 long non-coding(lnc) isoforms of known genes 1470 65.30612 5
Osa03LNT0218200.1 3 Osa03LNG0218200 16696253-16700803 long non-coding(lnc) isoforms of known genes 2907 38.56209 4
Osa03LNT0218200.3 3 Osa03LNG0218200 16696253-16700803 long non-coding(lnc) isoforms of known genes 2096 47.56679 3
Osa03LNT0218200.2 3 Osa03LNG0218200 16696253-16700803 long non-coding(lnc) isoforms of known genes 2556 39.78873 5
Osa03LNT0218300.1 3 Osa03LNG0218300 16696295-16700996 long non-coding(lnc) isoforms of known genes 1342 45.08197 9
Osa03LNT0466600.1 3 Osa03LNG0466600 16768709-16769004 intergenetic lncRNA (lincRNA) 296 23.31081 1
Osa03LNT0466700.1 3 Osa03LNG0466700 16768709-16769004 intergenetic lncRNA (lincRNA) 296 23.31081 1
Osa03LNT0218100.1 3 Osa03LNG0218100 16789620-16790813 intergenetic lncRNA (lincRNA) 764 40.31414 2
Osa03LNT0218500.1 3 Osa03LNG0218500 16937595-16940915 long non-coding(lnc) isoforms of known genes 1245 52.04819 9
Osa03LNT0218400.1 3 Osa03LNG0218400 16977997-16978309 intergenetic lncRNA (lincRNA) 313 39.29712 1
Osa03LNT0466800.1 3 Osa03LNG0466800 17146541-17146749 intergenetic lncRNA (lincRNA) 209 49.2823 1
Osa03LNT0218600.1 3 Osa03LNG0218600 17207401-17211110 long non-coding(lnc) isoforms of known genes 2157 45.85072 10
Osa03LNT0466900.1 3 Osa03LNG0466900 17284306-17284519 intergenetic lncRNA (lincRNA) 214 57.00935 1
Osa03LNT0218700.1 3 Osa03LNG0218700 17288187-17292842 long non-coding(lnc) isoforms of known genes 2574 42.30769 4