\
RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

filter

Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0414900.1 8 Osa08LNG0414900 21025547-21029093 long non-coding(lnc) isoforms of known genes 1579 55.9848 4
Osa08LNT0395400.1 8 Osa08LNG0395400 210568-212253 long non-coding(lnc) isoforms of known genes 1562 52.36876 2
Osa08LNT0397600.1 8 Osa08LNG0397600 2111196-2112027 sense lncRNA 669 36.02392 2
Osa08LNT0415000.1 8 Osa08LNG0415000 21164639-21169759 long non-coding(lnc) isoforms of known genes 2331 55.34106 6
Osa08LNT0415000.2 8 Osa08LNG0415000 21164639-21169759 long non-coding(lnc) isoforms of known genes 2274 55.40897 7
Osa08LNT0415100.1 8 Osa08LNG0415100 21173501-21176249 long non-coding(lnc) isoforms of known genes 1462 44.18605 7
Osa08LNT0415100.2 8 Osa08LNG0415100 21173501-21176249 long non-coding(lnc) isoforms of known genes 2431 46.40066 9
Osa08LNT0556200.1 8 Osa08LNG0556200 21313799-21314026 intergenetic lncRNA (lincRNA) 228 30.70175 1
Osa08LNT0556300.1 8 Osa08LNG0556300 21313801-21314024 intergenetic lncRNA (lincRNA) 224 30.35714 1
Osa08LNT0415200.2 8 Osa08LNG0415200 21450964-21456018 long non-coding(lnc) isoforms of known genes 1711 39.45061 8
Osa08LNT0415200.1 8 Osa08LNG0415200 21450964-21456018 long non-coding(lnc) isoforms of known genes 2037 47.07904 10
Osa08LNT0415300.2 8 Osa08LNG0415300 21765470-21770635 long non-coding(lnc) isoforms of known genes 3785 41.63804 5
Osa08LNT0415300.1 8 Osa08LNG0415300 21765470-21770635 long non-coding(lnc) isoforms of known genes 3857 42.6238 5
Osa08LNT0397700.1 8 Osa08LNG0397700 2178165-2180179 long non-coding(lnc) isoforms of known genes 1192 53.10403 5
Osa08LNT0397700.2 8 Osa08LNG0397700 2178165-2180179 long non-coding(lnc) isoforms of known genes 1200 53.0 5
Osa08LNT0415400.1 8 Osa08LNG0415400 21842124-21846835 long non-coding(lnc) isoforms of known genes 1547 50.35553 10
Osa08LNT0415500.1 8 Osa08LNG0415500 21921124-21924247 sense lncRNA 2391 41.44709 4
Osa08LNT0415700.1 8 Osa08LNG0415700 21951752-21955522 long non-coding(lnc) isoforms of known genes 3389 38.94954 4
Osa08LNT0415700.2 8 Osa08LNG0415700 21951752-21955522 long non-coding(lnc) isoforms of known genes 2581 41.1081 4
Osa08LNT0397800.1 8 Osa08LNG0397800 2195266-2196158 intergenetic lncRNA (lincRNA) 893 48.60022 1
Osa08LNT0415600.1 8 Osa08LNG0415600 21970243-21973220 intergenetic lncRNA (lincRNA) 2978 47.88449 1
Osa08LNT0415800.1 8 Osa08LNG0415800 22010621-22010841 intronic lncRNA 221 33.93665 1
Osa08LNT0415900.2 8 Osa08LNG0415900 22054013-22067125 long non-coding(lnc) isoforms of known genes 2079 45.88745 13
Osa08LNT0415900.1 8 Osa08LNG0415900 22054013-22067125 long non-coding(lnc) isoforms of known genes 2190 45.34247 12
Osa08LNT0416100.3 8 Osa08LNG0416100 22082679-22093734 long non-coding(lnc) isoforms of known genes 4012 46.80957 21
Osa08LNT0416100.2 8 Osa08LNG0416100 22082679-22093734 long non-coding(lnc) isoforms of known genes 3901 46.47526 20
Osa08LNT0416100.1 8 Osa08LNG0416100 22082679-22093734 long non-coding(lnc) isoforms of known genes 3975 46.08805 19
Osa08LNT0416000.1 8 Osa08LNG0416000 22152378-22153666 intergenetic lncRNA (lincRNA) 1289 35.84174 1
Osa08LNT0556400.1 8 Osa08LNG0556400 22481964-22482166 intergenetic lncRNA (lincRNA) 203 34.48276 1
Osa08LNT0416200.1 8 Osa08LNG0416200 22563623-22564414 intergenetic lncRNA (lincRNA) 792 66.16162 1
Osa08LNT0416300.1 8 Osa08LNG0416300 22616852-22619367 sense lncRNA 1644 66.9708 4
Osa08LNT0416400.1 8 Osa08LNG0416400 22624468-22627704 long non-coding(lnc) isoforms of known genes 2125 51.29412 5
Osa08LNT0416700.1 8 Osa08LNG0416700 22629681-22638406 long non-coding(lnc) isoforms of known genes 4212 52.30294 11
Osa08LNT0416700.2 8 Osa08LNG0416700 22629681-22638406 long non-coding(lnc) isoforms of known genes 1833 54.00982 5
Osa08LNT0416500.1 8 Osa08LNG0416500 22640713-22646105 long non-coding(lnc) isoforms of known genes 1669 51.16836 4
Osa08LNT0416600.1 8 Osa08LNG0416600 22656380-22659552 long non-coding(lnc) isoforms of known genes 2080 46.68269 6
Osa08LNT0416800.1 8 Osa08LNG0416800 22675914-22679299 long non-coding(lnc) isoforms of known genes 1754 51.88141 4
Osa08LNT0556500.1 8 Osa08LNG0556500 22857590-22857815 intergenetic lncRNA (lincRNA) 226 49.55752 1
Osa08LNT0416900.1 8 Osa08LNG0416900 22979072-22979927 intergenetic lncRNA (lincRNA) 594 47.9798 3
Osa08LNT0556700.1 8 Osa08LNG0556700 23016501-23016775 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa08LNT0556600.1 8 Osa08LNG0556600 23016501-23016775 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa08LNT0556800.1 8 Osa08LNG0556800 23016988-23017249 intergenetic lncRNA (lincRNA) 262 40.07634 1
Osa08LNT0556900.1 8 Osa08LNG0556900 23017673-23017887 intergenetic lncRNA (lincRNA) 215 57.67442 1
Osa08LNT0397900.1 8 Osa08LNG0397900 2310032-2315254 long non-coding(lnc) isoforms of known genes 2240 46.07143 10
Osa08LNT0417000.1 8 Osa08LNG0417000 23117166-23119489 long non-coding(lnc) isoforms of known genes 1839 48.99402 4
Osa08LNT0417100.1 8 Osa08LNG0417100 23147086-23151472 long non-coding(lnc) isoforms of known genes 1088 52.75735 7
Osa08LNT0417200.1 8 Osa08LNG0417200 23219093-23231034 long non-coding(lnc) isoforms of known genes 2574 45.29915 15
Osa08LNT0557100.1 8 Osa08LNG0557100 23242844-23243101 intergenetic lncRNA (lincRNA) 258 29.06977 1
Osa08LNT0557000.1 8 Osa08LNG0557000 23242844-23243101 intergenetic lncRNA (lincRNA) 258 29.06977 1
Osa08LNT0417300.1 8 Osa08LNG0417300 23468908-23472607 long non-coding(lnc) isoforms of known genes 2090 46.02871 5
Osa08LNT0417400.1 8 Osa08LNG0417400 23551865-23554169 long non-coding(lnc) isoforms of known genes 1067 48.26617 3
Osa08LNT0417500.1 8 Osa08LNG0417500 23576748-23579088 long non-coding(lnc) isoforms of known genes 1291 47.48257 6
Osa08LNT0557200.1 8 Osa08LNG0557200 23615957-23616201 intergenetic lncRNA (lincRNA) 245 24.89796 1
Osa08LNT0557300.1 8 Osa08LNG0557300 23616268-23616542 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa08LNT0557400.1 8 Osa08LNG0557400 23616268-23616542 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa08LNT0417700.1 8 Osa08LNG0417700 23623292-23628557 long non-coding(lnc) isoforms of known genes 2650 46.90566 13
Osa08LNT0417700.2 8 Osa08LNG0417700 23623292-23628557 long non-coding(lnc) isoforms of known genes 2295 49.28105 13
Osa08LNT0417600.1 8 Osa08LNG0417600 23679056-23681530 intergenetic lncRNA (lincRNA) 717 50.76709 3
Osa08LNT0417800.1 8 Osa08LNG0417800 23802955-23805451 long non-coding(lnc) isoforms of known genes 2426 54.86397 2
Osa08LNT0417900.1 8 Osa08LNG0417900 23807900-23810909 long non-coding(lnc) isoforms of known genes 949 51.73867 6
Osa08LNT0417900.2 8 Osa08LNG0417900 23807900-23810909 long non-coding(lnc) isoforms of known genes 942 51.80467 6
Osa08LNT0418000.1 8 Osa08LNG0418000 23826103-23827217 intergenetic lncRNA (lincRNA) 473 51.79704 2
Osa08LNT0418100.2 8 Osa08LNG0418100 23850439-23852872 long non-coding(lnc) isoforms of known genes 773 48.25356 4
Osa08LNT0418100.1 8 Osa08LNG0418100 23850439-23852872 long non-coding(lnc) isoforms of known genes 767 48.37027 4
Osa08LNT0418200.1 8 Osa08LNG0418200 23883849-23886487 long non-coding(lnc) isoforms of known genes 879 46.98521 6
Osa08LNT0418300.1 8 Osa08LNG0418300 23926958-23934308 long non-coding(lnc) isoforms of known genes 2713 45.30041 15
Osa08LNT0418400.1 8 Osa08LNG0418400 24031143-24031375 intergenetic lncRNA (lincRNA) 233 66.95279 1
Osa08LNT0394800.1 8 Osa08LNG0394800 24071-25909 intergenetic lncRNA (lincRNA) 1632 41.42157 3
Osa08LNT0418500.1 8 Osa08LNG0418500 24298120-24300110 intergenetic lncRNA (lincRNA) 1236 46.76375 2
Osa08LNT0418600.1 8 Osa08LNG0418600 24397033-24401324 long non-coding(lnc) isoforms of known genes 2975 41.0084 8
Osa08LNT0418700.1 8 Osa08LNG0418700 24398736-24399156 Antisense lncRNA 315 42.22222 2
Osa08LNT0418800.1 8 Osa08LNG0418800 24581457-24583695 long non-coding(lnc) isoforms of known genes 1581 57.55851 2
Osa08LNT0418900.1 8 Osa08LNG0418900 24593305-24597525 long non-coding(lnc) isoforms of known genes 3790 50.5277 4
Osa08LNT0419000.1 8 Osa08LNG0419000 24645932-24649832 long non-coding(lnc) isoforms of known genes 3379 45.22048 4
Osa08LNT0419100.1 8 Osa08LNG0419100 24795764-24796388 intergenetic lncRNA (lincRNA) 625 47.68 1
Osa08LNT0419200.1 8 Osa08LNG0419200 24807833-24812084 intergenetic lncRNA (lincRNA) 485 49.27835 3
Osa08LNT0419300.1 8 Osa08LNG0419300 24842097-24844490 intergenetic lncRNA (lincRNA) 1277 50.50901 5
Osa08LNT0419400.1 8 Osa08LNG0419400 24929699-24934781 long non-coding(lnc) isoforms of known genes 1217 48.80855 12
Osa08LNT0419500.1 8 Osa08LNG0419500 24993082-24994517 sense lncRNA 570 52.10526 2
Osa08LNT0419600.1 8 Osa08LNG0419600 25053426-25056287 sense lncRNA 556 48.20144 2
Osa08LNT0419700.2 8 Osa08LNG0419700 25064047-25066788 long non-coding(lnc) isoforms of known genes 1298 48.53621 7
Osa08LNT0419700.1 8 Osa08LNG0419700 25064047-25066788 long non-coding(lnc) isoforms of known genes 1293 48.56922 7
Osa08LNT0398200.1 8 Osa08LNG0398200 2507299-2514517 long non-coding(lnc) isoforms of known genes 3104 44.23325 10
Osa08LNT0419800.1 8 Osa08LNG0419800 25196760-25202873 long non-coding(lnc) isoforms of known genes 1996 50.4008 7
Osa08LNT0419800.3 8 Osa08LNG0419800 25196760-25202873 long non-coding(lnc) isoforms of known genes 3050 45.21311 5
Osa08LNT0419800.2 8 Osa08LNG0419800 25196760-25202873 long non-coding(lnc) isoforms of known genes 3353 44.0501 6
Osa08LNT0419900.1 8 Osa08LNG0419900 25301706-25302366 intergenetic lncRNA (lincRNA) 661 50.5295 1
Osa08LNT0420000.1 8 Osa08LNG0420000 25377676-25381270 long non-coding(lnc) isoforms of known genes 2804 52.46077 4
Osa08LNT0420100.1 8 Osa08LNG0420100 25388405-25392367 long non-coding(lnc) isoforms of known genes 1752 53.53881 5
Osa08LNT0420200.1 8 Osa08LNG0420200 25396243-25397205 intronic lncRNA 963 34.57944 1
Osa08LNT0557500.1 8 Osa08LNG0557500 25560520-25560764 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa08LNT0557600.1 8 Osa08LNG0557600 25560520-25560764 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa08LNT0420400.1 8 Osa08LNG0420400 25652873-25663757 long non-coding(lnc) isoforms of known genes 3913 44.41605 35
Osa08LNT0420300.1 8 Osa08LNG0420300 25683618-25686522 long non-coding(lnc) isoforms of known genes 1847 49.1608 8
Osa08LNT0420500.1 8 Osa08LNG0420500 25687727-25690627 long non-coding(lnc) isoforms of known genes 975 50.25641 9
Osa08LNT0420600.1 8 Osa08LNG0420600 25719540-25721973 sense lncRNA 2306 50.39029 2
Osa08LNT0398000.1 8 Osa08LNG0398000 2572005-2573258 sense lncRNA 332 50.90361 2
Osa08LNT0398300.1 8 Osa08LNG0398300 2575784-2584593 long non-coding(lnc) isoforms of known genes 2851 48.47422 12
Osa08LNT0398300.3 8 Osa08LNG0398300 2575784-2584593 long non-coding(lnc) isoforms of known genes 2108 50.42694 11
Osa08LNT0398300.2 8 Osa08LNG0398300 2575784-2584593 long non-coding(lnc) isoforms of known genes 1640 50.4878 10