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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0087500.1 11 Osa11LNG0087500 3418636-3424010 long non-coding(lnc) isoforms of known genes 2373 47.40834 13
Osa11LNT0082800.1 11 Osa11LNG0082800 342438-347655 long non-coding(lnc) isoforms of known genes 1710 44.15205 5
Osa11LNT0087600.1 11 Osa11LNG0087600 3463910-3467993 long non-coding(lnc) isoforms of known genes 2221 49.79739 2
Osa11LNT0087700.3 11 Osa11LNG0087700 3464914-3465948 Antisense lncRNA 456 45.39474 4
Osa11LNT0087700.2 11 Osa11LNG0087700 3464914-3465948 Antisense lncRNA 327 44.0367 4
Osa11LNT0087700.1 11 Osa11LNG0087700 3464914-3465948 Antisense lncRNA 390 45.38462 3
Osa11LNT0087800.1 11 Osa11LNG0087800 3652754-3653647 intergenetic lncRNA (lincRNA) 584 57.36301 2
Osa11LNT0087900.1 11 Osa11LNG0087900 3739630-3743522 long non-coding(lnc) isoforms of known genes 2775 46.73874 4
Osa11LNT0088000.1 11 Osa11LNG0088000 3740057-3742189 long non-coding(lnc) isoforms of known genes 1692 44.20804 2
Osa11LNT0088100.2 11 Osa11LNG0088100 3776852-3778870 long non-coding(lnc) isoforms of known genes 1236 47.3301 3
Osa11LNT0088100.1 11 Osa11LNG0088100 3776852-3778870 long non-coding(lnc) isoforms of known genes 1488 50.26882 2
Osa11LNT0082900.1 11 Osa11LNG0082900 397421-401936 long non-coding(lnc) isoforms of known genes 2482 44.92345 10
Osa11LNT0088200.1 11 Osa11LNG0088200 4004606-4010994 long non-coding(lnc) isoforms of known genes 1313 46.68698 9
Osa11LNT0088300.1 11 Osa11LNG0088300 4014842-4017984 long non-coding(lnc) isoforms of known genes 2110 44.64455 6
Osa11LNT0088400.1 11 Osa11LNG0088400 4134329-4140479 long non-coding(lnc) isoforms of known genes 2061 46.04561 8
Osa11LNT0088500.1 11 Osa11LNG0088500 4299277-4301777 long non-coding(lnc) isoforms of known genes 2412 52.4461 2
Osa11LNT0532300.1 11 Osa11LNG0532300 4475197-4475453 intergenetic lncRNA (lincRNA) 257 25.29183 1
Osa11LNT0088600.1 11 Osa11LNG0088600 4505037-4505792 intergenetic lncRNA (lincRNA) 756 58.46561 1
Osa11LNT0088700.1 11 Osa11LNG0088700 4529725-4529981 intronic lncRNA 257 26.84825 1
Osa11LNT0088800.1 11 Osa11LNG0088800 4529725-4529981 intronic lncRNA 257 26.84825 1
Osa11LNT0088900.1 11 Osa11LNG0088900 4533901-4534143 intronic lncRNA 243 24.69136 1
Osa11LNT0089000.3 11 Osa11LNG0089000 4557869-4566678 long non-coding(lnc) isoforms of known genes 3142 47.5175 13
Osa11LNT0089000.4 11 Osa11LNG0089000 4557869-4566678 long non-coding(lnc) isoforms of known genes 2890 47.61246 13
Osa11LNT0089000.2 11 Osa11LNG0089000 4557869-4566678 long non-coding(lnc) isoforms of known genes 3168 47.25379 10
Osa11LNT0089000.1 11 Osa11LNG0089000 4557869-4566678 long non-coding(lnc) isoforms of known genes 2877 47.65381 13