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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0089100.1 11 Osa11LNG0089100 4559721-4559941 intronic lncRNA 221 43.8914 1
Osa11LNT0083000.1 11 Osa11LNG0083000 457195-461669 long non-coding(lnc) isoforms of known genes 3996 47.0971 3
Osa11LNT0089200.1 11 Osa11LNG0089200 4624773-4624979 intergenetic lncRNA (lincRNA) 207 24.15459 1
Osa11LNT0089300.1 11 Osa11LNG0089300 4686726-4687695 intergenetic lncRNA (lincRNA) 970 37.83505 1
Osa11LNT0089500.1 11 Osa11LNG0089500 4866531-4871507 long non-coding(lnc) isoforms of known genes 1762 45.3462 9
Osa11LNT0089400.1 11 Osa11LNG0089400 4894703-4898060 long non-coding(lnc) isoforms of known genes 2814 38.30846 3
Osa11LNT0089600.1 11 Osa11LNG0089600 5168892-5171213 long non-coding(lnc) isoforms of known genes 2118 38.52691 3
Osa11LNT0089700.1 11 Osa11LNG0089700 5173514-5176121 long non-coding(lnc) isoforms of known genes 1337 47.3448 4
Osa11LNT0532400.1 11 Osa11LNG0532400 5200487-5200764 intergenetic lncRNA (lincRNA) 278 26.61871 1
Osa11LNT0532500.1 11 Osa11LNG0532500 5200487-5200764 intergenetic lncRNA (lincRNA) 278 26.61871 1
Osa11LNT0089800.1 11 Osa11LNG0089800 5236336-5240680 sense lncRNA 665 58.19549 2
Osa11LNT0083100.1 11 Osa11LNG0083100 528175-530582 intergenetic lncRNA (lincRNA) 722 44.18283 2
Osa11LNT0083200.1 11 Osa11LNG0083200 531045-532220 long non-coding(lnc) isoforms of known genes 630 54.92063 2
Osa11LNT0089900.1 11 Osa11LNG0089900 5336615-5339804 sense lncRNA 2986 44.70864 3
Osa11LNT0090000.1 11 Osa11LNG0090000 5433678-5434171 intergenetic lncRNA (lincRNA) 494 56.47773 1
Osa11LNT0532600.1 11 Osa11LNG0532600 5450912-5451170 intergenetic lncRNA (lincRNA) 259 42.47104 1
Osa11LNT0090100.1 11 Osa11LNG0090100 5557263-5560160 long non-coding(lnc) isoforms of known genes 2092 47.89675 4
Osa11LNT0090200.1 11 Osa11LNG0090200 5630727-5634825 long non-coding(lnc) isoforms of known genes 2314 45.59205 4
Osa11LNT0083300.1 11 Osa11LNG0083300 563239-564130 sense lncRNA 675 54.66667 3
Osa11LNT0090300.2 11 Osa11LNG0090300 5770591-5772063 intergenetic lncRNA (lincRNA) 842 55.81948 3
Osa11LNT0090300.1 11 Osa11LNG0090300 5770591-5772063 intergenetic lncRNA (lincRNA) 972 53.39506 2
Osa11LNT0090400.1 11 Osa11LNG0090400 5835137-5840796 long non-coding(lnc) isoforms of known genes 2490 42.20884 14
Osa11LNT0090500.1 11 Osa11LNG0090500 5873537-5881813 long non-coding(lnc) isoforms of known genes 2371 40.95318 15
Osa11LNT0090600.1 11 Osa11LNG0090600 5898818-5902693 long non-coding(lnc) isoforms of known genes 2301 45.71925 10
Osa11LNT0090800.1 11 Osa11LNG0090800 5922025-5926143 long non-coding(lnc) isoforms of known genes 1280 45.46875 9