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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0090700.1 11 Osa11LNG0090700 5946387-5946999 intergenetic lncRNA (lincRNA) 613 33.93148 1
Osa11LNT0090900.1 11 Osa11LNG0090900 6088031-6091472 long non-coding(lnc) isoforms of known genes 1423 52.07309 6
Osa11LNT0091000.1 11 Osa11LNG0091000 6114798-6127569 long non-coding(lnc) isoforms of known genes 2687 44.13844 18
Osa11LNT0532700.1 11 Osa11LNG0532700 6139544-6139817 intergenetic lncRNA (lincRNA) 274 25.18248 1
Osa11LNT0532800.1 11 Osa11LNG0532800 6139544-6139817 intergenetic lncRNA (lincRNA) 274 25.18248 1
Osa11LNT0091100.1 11 Osa11LNG0091100 6201172-6205038 long non-coding(lnc) isoforms of known genes 1549 45.77147 6
Osa11LNT0533000.1 11 Osa11LNG0533000 6214240-6214514 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa11LNT0532900.1 11 Osa11LNG0532900 6214240-6214514 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa11LNT0533100.1 11 Osa11LNG0533100 6243303-6243558 intergenetic lncRNA (lincRNA) 256 28.125 1
Osa11LNT0091200.1 11 Osa11LNG0091200 6520202-6520894 Antisense lncRNA 369 62.33062 5
Osa11LNT0091300.1 11 Osa11LNG0091300 6538667-6546026 long non-coding(lnc) isoforms of known genes 3617 48.41028 4
Osa11LNT0091400.1 11 Osa11LNG0091400 6638306-6642853 sense lncRNA 3316 42.73221 2
Osa11LNT0083400.1 11 Osa11LNG0083400 664534-671668 long non-coding(lnc) isoforms of known genes 3620 45.46961 8
Osa11LNT0091500.1 11 Osa11LNG0091500 6685665-6693917 long non-coding(lnc) isoforms of known genes 1078 54.73098 4
Osa11LNT0091500.2 11 Osa11LNG0091500 6685665-6693917 sense lncRNA 802 54.73815 3
Osa11LNT0091500.3 11 Osa11LNG0091500 6685665-6693917 long non-coding(lnc) isoforms of known genes 3013 54.39761 3
Osa11LNT0091600.1 11 Osa11LNG0091600 6861930-6865491 long non-coding(lnc) isoforms of known genes 811 56.10358 3
Osa11LNT0083500.1 11 Osa11LNG0083500 705974-708769 long non-coding(lnc) isoforms of known genes 1047 60.64947 3
Osa11LNT0533200.1 11 Osa11LNG0533200 7076416-7076690 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0533300.1 11 Osa11LNG0533300 7076416-7076690 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa11LNT0091700.2 11 Osa11LNG0091700 7121644-7124832 intergenetic lncRNA (lincRNA) 518 41.89189 3
Osa11LNT0091700.1 11 Osa11LNG0091700 7121644-7124832 intergenetic lncRNA (lincRNA) 524 41.79389 3
Osa11LNT0091800.1 11 Osa11LNG0091800 7200088-7214571 long non-coding(lnc) isoforms of known genes 896 47.43304 6
Osa11LNT0092100.1 11 Osa11LNG0092100 7250435-7254519 long non-coding(lnc) isoforms of known genes 2399 43.97666 8
Osa11LNT0092100.3 11 Osa11LNG0092100 7250435-7254519 long non-coding(lnc) isoforms of known genes 1431 49.26625 9