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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa11LNT0094300.1 11 Osa11LNG0094300 9463373-9466447 long non-coding(lnc) isoforms of known genes 2577 45.9449 2
Osa11LNT0083700.1 11 Osa11LNG0083700 947566-952283 long non-coding(lnc) isoforms of known genes 2978 45.3996 5
Osa11LNT0083800.1 11 Osa11LNG0083800 959445-963088 long non-coding(lnc) isoforms of known genes 829 43.06393 2
Osa11LNT0083800.2 11 Osa11LNG0083800 959445-963088 long non-coding(lnc) isoforms of known genes 960 56.5625 2
Osa11LNT0094400.1 11 Osa11LNG0094400 9674510-9675803 intergenetic lncRNA (lincRNA) 1294 52.47295 1
Osa11LNT0094500.1 11 Osa11LNG0094500 9724503-9727093 long non-coding(lnc) isoforms of known genes 2059 32.58864 6
Osa11LNT0535200.1 11 Osa11LNG0535200 9764410-9764684 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0535100.1 11 Osa11LNG0535100 9764410-9764684 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa11LNT0094600.1 11 Osa11LNG0094600 9815907-9820202 long non-coding(lnc) isoforms of known genes 2010 44.32836 10
Osa11LNT0535300.1 11 Osa11LNG0535300 9967781-9968022 intergenetic lncRNA (lincRNA) 242 26.03306 1
Osa11LNT0535500.1 11 Osa11LNG0535500 9968092-9968317 intergenetic lncRNA (lincRNA) 226 26.99115 1
Osa11LNT0535400.1 11 Osa11LNG0535400 9968092-9968317 intergenetic lncRNA (lincRNA) 226 26.99115 1
Osa12LNT0123600.1 12 Osa12LNG0123600 10016678-10016898 sense lncRNA 221 38.00905 1
Osa12LNT0113200.1 12 Osa12LNG0113200 1012305-1015316 long non-coding(lnc) isoforms of known genes 883 44.50736 5
Osa12LNT0123700.1 12 Osa12LNG0123700 10136113-10139539 long non-coding(lnc) isoforms of known genes 1770 50.56497 3
Osa12LNT0561400.1 12 Osa12LNG0561400 10214990-10215264 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa12LNT0561300.1 12 Osa12LNG0561300 10214990-10215264 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa12LNT0123800.1 12 Osa12LNG0123800 10405232-10405829 intergenetic lncRNA (lincRNA) 598 38.46154 1
Osa12LNT0123900.1 12 Osa12LNG0123900 10406234-10406722 intergenetic lncRNA (lincRNA) 409 38.63081 2
Osa12LNT0124000.1 12 Osa12LNG0124000 10436138-10443948 long non-coding(lnc) isoforms of known genes 2117 51.11006 9
Osa12LNT0124100.1 12 Osa12LNG0124100 10454542-10458551 long non-coding(lnc) isoforms of known genes 561 47.59358 3
Osa12LNT0558300.1 12 Osa12LNG0558300 1058699-1058943 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa12LNT0558400.1 12 Osa12LNG0558400 1058699-1058943 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa12LNT0124200.1 12 Osa12LNG0124200 10606417-10611137 long non-coding(lnc) isoforms of known genes 3084 43.38521 3
Osa12LNT0113300.1 12 Osa12LNG0113300 1070162-1072495 intergenetic lncRNA (lincRNA) 1925 38.85714 4