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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0235700.1 3 Osa03LNG0235700 31321804-31326935 long non-coding(lnc) isoforms of known genes 1600 58.1875 4
Osa03LNT0472000.1 3 Osa03LNG0472000 31341552-31341826 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa03LNT0471900.1 3 Osa03LNG0471900 31341552-31341826 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa03LNT0472100.1 3 Osa03LNG0472100 31341893-31342136 intergenetic lncRNA (lincRNA) 244 26.63934 1
Osa03LNT0235800.1 3 Osa03LNG0235800 31455750-31458865 long non-coding(lnc) isoforms of known genes 1616 48.45297 7
Osa03LNT0235900.1 3 Osa03LNG0235900 31469926-31471769 long non-coding(lnc) isoforms of known genes 745 58.38926 3
Osa03LNT0236000.1 3 Osa03LNG0236000 31612448-31614920 long non-coding(lnc) isoforms of known genes 1314 42.84627 6
Osa03LNT0236100.1 3 Osa03LNG0236100 31682120-31685009 long non-coding(lnc) isoforms of known genes 2231 55.44599 6
Osa03LNT0236300.1 3 Osa03LNG0236300 31825518-31831294 long non-coding(lnc) isoforms of known genes 3938 45.09904 13
Osa03LNT0236200.1 3 Osa03LNG0236200 31839790-31844485 long non-coding(lnc) isoforms of known genes 2400 50.20833 6
Osa03LNT0236400.1 3 Osa03LNG0236400 31860523-31864328 long non-coding(lnc) isoforms of known genes 1902 44.37434 9
Osa03LNT0472200.1 3 Osa03LNG0472200 32000791-32001034 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa03LNT0236500.1 3 Osa03LNG0236500 32035018-32040880 long non-coding(lnc) isoforms of known genes 2626 45.27799 13
Osa03LNT0236600.1 3 Osa03LNG0236600 32043978-32048393 long non-coding(lnc) isoforms of known genes 3668 48.71865 3
Osa03LNT0236700.1 3 Osa03LNG0236700 32044090-32047358 long non-coding(lnc) isoforms of known genes 2254 44.05501 2
Osa03LNT0236800.1 3 Osa03LNG0236800 32096850-32103996 long non-coding(lnc) isoforms of known genes 2250 48.75556 17
Osa03LNT0236800.2 3 Osa03LNG0236800 32096850-32103996 long non-coding(lnc) isoforms of known genes 2734 47.54938 17
Osa03LNT0236900.1 3 Osa03LNG0236900 32182835-32183464 sense lncRNA 536 59.14179 2
Osa03LNT0237000.1 3 Osa03LNG0237000 32183701-32184319 Antisense lncRNA 333 62.46246 4
Osa03LNT0237100.1 3 Osa03LNG0237100 32251974-32257954 long non-coding(lnc) isoforms of known genes 3947 47.75779 8
Osa03LNT0472300.1 3 Osa03LNG0472300 32301113-32301341 intergenetic lncRNA (lincRNA) 229 26.63755 1
Osa03LNT0237200.1 3 Osa03LNG0237200 32325421-32327027 sense lncRNA 1520 55.0 2
Osa03LNT0237300.2 3 Osa03LNG0237300 32329019-32335108 Antisense lncRNA 3691 40.63939 6
Osa03LNT0237300.1 3 Osa03LNG0237300 32329019-32335108 Antisense lncRNA 2218 41.70424 5
Osa03LNT0237400.1 3 Osa03LNG0237400 32384836-32388216 long non-coding(lnc) isoforms of known genes 1709 47.10357 11
Osa03LNT0237500.1 3 Osa03LNG0237500 32398327-32399844 sense lncRNA 488 46.92623 2
Osa03LNT0237700.1 3 Osa03LNG0237700 32491934-32494484 intergenetic lncRNA (lincRNA) 893 50.95185 2
Osa03LNT0237600.1 3 Osa03LNG0237600 32495294-32496690 intergenetic lncRNA (lincRNA) 1397 36.22047 1
Osa03LNT0237800.1 3 Osa03LNG0237800 32513643-32515995 long non-coding(lnc) isoforms of known genes 1492 47.92225 6
Osa03LNT0238100.1 3 Osa03LNG0238100 32550892-32554310 long non-coding(lnc) isoforms of known genes 1338 50.22422 10
Osa03LNT0238200.1 3 Osa03LNG0238200 32560362-32562816 long non-coding(lnc) isoforms of known genes 1350 39.18519 5
Osa03LNT0237900.1 3 Osa03LNG0237900 32578026-32578669 intergenetic lncRNA (lincRNA) 644 48.4472 1
Osa03LNT0238000.1 3 Osa03LNG0238000 32580257-32580718 intronic lncRNA 462 45.671 1
Osa03LNT0238300.1 3 Osa03LNG0238300 32591747-32599028 long non-coding(lnc) isoforms of known genes 5105 44.11361 6
Osa03LNT0238400.1 3 Osa03LNG0238400 32696464-32698801 long non-coding(lnc) isoforms of known genes 1161 55.98622 3
Osa03LNT0238500.1 3 Osa03LNG0238500 32829161-32832483 long non-coding(lnc) isoforms of known genes 1452 40.01377 5
Osa03LNT0238700.1 3 Osa03LNG0238700 32869591-32884185 long non-coding(lnc) isoforms of known genes 2862 53.98323 10
Osa03LNT0238600.2 3 Osa03LNG0238600 32911242-32915158 long non-coding(lnc) isoforms of known genes 1802 40.45505 5
Osa03LNT0238600.1 3 Osa03LNG0238600 32911242-32915158 long non-coding(lnc) isoforms of known genes 1405 47.04626 6
Osa03LNT0472400.1 3 Osa03LNG0472400 32942256-32942529 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa03LNT0472500.1 3 Osa03LNG0472500 32942256-32942529 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa03LNT0238800.1 3 Osa03LNG0238800 32974324-32976911 long non-coding(lnc) isoforms of known genes 1152 46.44097 2
Osa03LNT0238900.1 3 Osa03LNG0238900 33038059-33043581 long non-coding(lnc) isoforms of known genes 1765 49.46176 11
Osa03LNT0239000.1 3 Osa03LNG0239000 33065138-33070847 long non-coding(lnc) isoforms of known genes 2477 49.77796 9
Osa03LNT0239100.1 3 Osa03LNG0239100 33138623-33141454 long non-coding(lnc) isoforms of known genes 1597 49.90607 5
Osa03LNT0472600.1 3 Osa03LNG0472600 33177335-33177564 intergenetic lncRNA (lincRNA) 230 27.82609 1
Osa03LNT0239200.1 3 Osa03LNG0239200 33193897-33198077 long non-coding(lnc) isoforms of known genes 1773 48.56176 9
Osa03LNT0239300.1 3 Osa03LNG0239300 33354979-33355456 intergenetic lncRNA (lincRNA) 478 63.38912 1
Osa03LNT0239400.1 3 Osa03LNG0239400 33394172-33402259 long non-coding(lnc) isoforms of known genes 3498 42.62436 7
Osa03LNT0239500.1 3 Osa03LNG0239500 33398069-33398300 intronic lncRNA 232 28.01724 1