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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0001900.1 1 Osa01LNG0001900 1926905-1927547 intergenetic lncRNA (lincRNA) 643 55.83204 1
Osa01LNT0022000.1 1 Osa01LNG0022000 19303393-19319879 long non-coding(lnc) isoforms of known genes 5296 41.61631 37
Osa01LNT0022100.1 1 Osa01LNG0022100 19454154-19458225 long non-coding(lnc) isoforms of known genes 3339 47.88859 8
Osa01LNT0022100.2 1 Osa01LNG0022100 19454154-19458225 long non-coding(lnc) isoforms of known genes 2862 48.25297 8
Osa01LNT0022200.1 1 Osa01LNG0022200 19469262-19477590 long non-coding(lnc) isoforms of known genes 1906 45.12067 14
Osa01LNT0002000.1 1 Osa01LNG0002000 1957495-1961530 Antisense lncRNA 1345 57.24907 2
Osa01LNT0002100.1 1 Osa01LNG0002100 1957847-1962653 long non-coding(lnc) isoforms of known genes 2409 48.15276 4
Osa01LNT0022300.1 1 Osa01LNG0022300 19578486-19579041 intergenetic lncRNA (lincRNA) 556 59.53237 1
Osa01LNT0458500.1 1 Osa01LNG0458500 19738355-19738629 intergenetic lncRNA (lincRNA) 275 27.27273 1
Osa01LNT0458600.1 1 Osa01LNG0458600 19738355-19738629 intergenetic lncRNA (lincRNA) 275 27.27273 1
Osa01LNT0458800.1 1 Osa01LNG0458800 19822898-19823148 intergenetic lncRNA (lincRNA) 251 27.49004 1
Osa01LNT0458700.1 1 Osa01LNG0458700 19822898-19823148 intergenetic lncRNA (lincRNA) 251 27.49004 1
Osa01LNT0458900.1 1 Osa01LNG0458900 19823216-19823459 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa01LNT0022400.1 1 Osa01LNG0022400 19845644-19848399 sense lncRNA 1281 52.0687 4
Osa01LNT0022600.1 1 Osa01LNG0022600 19962930-19970099 long non-coding(lnc) isoforms of known genes 2417 47.78651 12
Osa01LNT0022500.1 1 Osa01LNG0022500 19988588-19988884 intergenetic lncRNA (lincRNA) 297 46.46465 1
Osa01LNT0459100.1 1 Osa01LNG0459100 20068894-20069151 intergenetic lncRNA (lincRNA) 258 26.35659 1
Osa01LNT0459000.1 1 Osa01LNG0459000 20068894-20069151 intergenetic lncRNA (lincRNA) 258 26.35659 1
Osa01LNT0022800.1 1 Osa01LNG0022800 20197318-20199817 sense lncRNA 2412 39.09619 2
Osa01LNT0022700.1 1 Osa01LNG0022700 20296917-20302467 long non-coding(lnc) isoforms of known genes 1141 43.29535 8
Osa01LNT0022900.1 1 Osa01LNG0022900 20351629-20364373 long non-coding(lnc) isoforms of known genes 3924 44.92864 12
Osa01LNT0023000.1 1 Osa01LNG0023000 20380989-20384879 long non-coding(lnc) isoforms of known genes 1943 49.1508 4
Osa01LNT0023200.1 1 Osa01LNG0023200 20407488-20414976 long non-coding(lnc) isoforms of known genes 2707 39.00997 15
Osa01LNT0023100.1 1 Osa01LNG0023100 20450218-20450982 intergenetic lncRNA (lincRNA) 765 48.36601 1
Osa01LNT0002200.1 1 Osa01LNG0002200 2046218-2053056 long non-coding(lnc) isoforms of known genes 894 52.57271 2