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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0128300.2 12 Osa12LNG0128300 15894622-15899503 long non-coding(lnc) isoforms of known genes 2716 43.7408 9
Osa12LNT0128300.1 12 Osa12LNG0128300 15894622-15899503 long non-coding(lnc) isoforms of known genes 2504 44.00958 9
Osa12LNT0114200.1 12 Osa12LNG0114200 1594471-1599099 long non-coding(lnc) isoforms of known genes 1112 49.19065 4
Osa12LNT0563000.1 12 Osa12LNG0563000 15953846-15954120 intergenetic lncRNA (lincRNA) 275 28.36364 1
Osa12LNT0563100.1 12 Osa12LNG0563100 15953846-15954120 intergenetic lncRNA (lincRNA) 275 28.36364 1
Osa12LNT0128200.1 12 Osa12LNG0128200 15989561-15990673 intergenetic lncRNA (lincRNA) 1113 52.65049 1
Osa12LNT0114300.1 12 Osa12LNG0114300 1606119-1613167 long non-coding(lnc) isoforms of known genes 1823 43.06089 17
Osa12LNT0128600.2 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 880 44.20455 3
Osa12LNT0128600.3 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 1626 46.61747 5
Osa12LNT0128600.1 12 Osa12LNG0128600 16196141-16199451 long non-coding(lnc) isoforms of known genes 1562 46.41485 12
Osa12LNT0563200.1 12 Osa12LNG0563200 16253173-16253373 intergenetic lncRNA (lincRNA) 201 49.25373 1
Osa12LNT0114400.2 12 Osa12LNG0114400 1634750-1645907 long non-coding(lnc) isoforms of known genes 1680 39.04762 10
Osa12LNT0114400.1 12 Osa12LNG0114400 1634750-1645907 long non-coding(lnc) isoforms of known genes 1756 38.95216 11
Osa12LNT0128400.1 12 Osa12LNG0128400 16404344-16406639 long non-coding(lnc) isoforms of known genes 1686 49.82206 3
Osa12LNT0128500.1 12 Osa12LNG0128500 16500219-16507887 long non-coding(lnc) isoforms of known genes 1489 55.87643 2
Osa12LNT0114500.1 12 Osa12LNG0114500 1650866-1652223 long non-coding(lnc) isoforms of known genes 931 45.43502 2
Osa12LNT0128700.3 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4222 46.58929 4
Osa12LNT0128700.2 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4063 46.83731 4
Osa12LNT0128700.1 12 Osa12LNG0128700 16589263-16595990 long non-coding(lnc) isoforms of known genes 4428 46.16079 3
Osa12LNT0128800.1 12 Osa12LNG0128800 16685499-16692195 sense lncRNA 3447 46.79431 4
Osa12LNT0114600.1 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4953 41.57077 30
Osa12LNT0114600.2 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4957 41.59774 30
Osa12LNT0114700.1 12 Osa12LNG0114700 1689907-1690684 intergenetic lncRNA (lincRNA) 320 42.1875 3
Osa12LNT0114800.1 12 Osa12LNG0114800 1690776-1691604 intergenetic lncRNA (lincRNA) 426 60.32864 2
Osa12LNT0563300.1 12 Osa12LNG0563300 17030726-17030951 intergenetic lncRNA (lincRNA) 226 49.55752 1