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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0201800.1 3 Osa03LNG0201800 5994179-5997434 long non-coding(lnc) isoforms of known genes 2110 44.88152 4
Osa03LNT0201900.1 3 Osa03LNG0201900 6179834-6182564 long non-coding(lnc) isoforms of known genes 1660 57.40964 6
Osa03LNT0202000.1 3 Osa03LNG0202000 6184605-6187889 intergenetic lncRNA (lincRNA) 2917 46.17758 3
Osa03LNT0202100.1 3 Osa03LNG0202100 6218057-6225065 long non-coding(lnc) isoforms of known genes 1330 44.58647 5
Osa03LNT0202200.1 3 Osa03LNG0202200 6358095-6365379 long non-coding(lnc) isoforms of known genes 2846 42.30499 16
Osa03LNT0202200.2 3 Osa03LNG0202200 6358095-6365379 long non-coding(lnc) isoforms of known genes 2667 41.5823 16
Osa03LNT0202300.1 3 Osa03LNG0202300 6380281-6388758 long non-coding(lnc) isoforms of known genes 4183 45.13507 10
Osa03LNT0193800.1 3 Osa03LNG0193800 640597-645631 long non-coding(lnc) isoforms of known genes 2528 47.66614 15
Osa03LNT0202400.1 3 Osa03LNG0202400 6468343-6476409 long non-coding(lnc) isoforms of known genes 3150 44.95238 19
Osa03LNT0202500.1 3 Osa03LNG0202500 6522419-6523522 intergenetic lncRNA (lincRNA) 878 46.35535 2
Osa03LNT0202500.2 3 Osa03LNG0202500 6522419-6523522 intergenetic lncRNA (lincRNA) 992 47.07661 2
Osa03LNT0463200.1 3 Osa03LNG0463200 6534676-6534877 intergenetic lncRNA (lincRNA) 202 25.24752 1
Osa03LNT0193700.1 3 Osa03LNG0193700 656536-657827 long non-coding(lnc) isoforms of known genes 543 45.67219 3
Osa03LNT0193900.2 3 Osa03LNG0193900 662337-666757 long non-coding(lnc) isoforms of known genes 1886 51.74973 4
Osa03LNT0193900.1 3 Osa03LNG0193900 662337-666757 long non-coding(lnc) isoforms of known genes 2990 45.45151 3
Osa03LNT0202600.1 3 Osa03LNG0202600 6706188-6710441 long non-coding(lnc) isoforms of known genes 1989 59.72851 4
Osa03LNT0463300.1 3 Osa03LNG0463300 6871487-6871720 intergenetic lncRNA (lincRNA) 234 30.34188 1
Osa03LNT0202800.1 3 Osa03LNG0202800 6871825-6875383 long non-coding(lnc) isoforms of known genes 931 48.01289 9
Osa03LNT0202700.1 3 Osa03LNG0202700 6880238-6880748 intergenetic lncRNA (lincRNA) 511 50.88063 1
Osa03LNT0202900.1 3 Osa03LNG0202900 6974763-6978108 long non-coding(lnc) isoforms of known genes 1092 54.21245 3
Osa03LNT0203000.1 3 Osa03LNG0203000 6980578-6986640 long non-coding(lnc) isoforms of known genes 3336 44.78417 11
Osa03LNT0203100.1 3 Osa03LNG0203100 7102183-7104679 long non-coding(lnc) isoforms of known genes 623 54.25361 4
Osa03LNT0203300.1 3 Osa03LNG0203300 7111054-7115273 long non-coding(lnc) isoforms of known genes 1319 59.5906 7
Osa03LNT0203200.1 3 Osa03LNG0203200 7128274-7130329 long non-coding(lnc) isoforms of known genes 1383 56.39913 4
Osa03LNT0203400.1 3 Osa03LNG0203400 7139074-7146865 long non-coding(lnc) isoforms of known genes 2202 46.13987 6
Osa03LNT0203500.1 3 Osa03LNG0203500 7163390-7168860 long non-coding(lnc) isoforms of known genes 1998 45.2953 6
Osa03LNT0203500.2 3 Osa03LNG0203500 7163390-7168860 long non-coding(lnc) isoforms of known genes 2500 43.08 6
Osa03LNT0203600.1 3 Osa03LNG0203600 7290796-7293226 long non-coding(lnc) isoforms of known genes 1023 51.31965 9
Osa03LNT0203700.2 3 Osa03LNG0203700 7329417-7333788 long non-coding(lnc) isoforms of known genes 3087 50.21056 6
Osa03LNT0203700.1 3 Osa03LNG0203700 7329417-7333788 long non-coding(lnc) isoforms of known genes 2275 46.94505 8
Osa03LNT0203800.1 3 Osa03LNG0203800 7358092-7369205 long non-coding(lnc) isoforms of known genes 2491 42.15175 16
Osa03LNT0203900.1 3 Osa03LNG0203900 7366276-7366522 intronic lncRNA 247 40.08097 1
Osa03LNT0204000.1 3 Osa03LNG0204000 7565328-7567774 long non-coding(lnc) isoforms of known genes 2351 48.95789 2
Osa03LNT0204100.1 3 Osa03LNG0204100 7573271-7577555 long non-coding(lnc) isoforms of known genes 2321 47.39336 12
Osa03LNT0204100.2 3 Osa03LNG0204100 7573271-7577555 long non-coding(lnc) isoforms of known genes 2252 47.60213 11
Osa03LNT0204200.1 3 Osa03LNG0204200 7573972-7575260 long non-coding(lnc) isoforms of known genes 934 39.50749 3
Osa03LNT0204300.1 3 Osa03LNG0204300 7579448-7583738 long non-coding(lnc) isoforms of known genes 1527 49.63982 11
Osa03LNT0463400.1 3 Osa03LNG0463400 7734544-7734747 intergenetic lncRNA (lincRNA) 204 25.0 1
Osa03LNT0204400.1 3 Osa03LNG0204400 7749683-7752162 intergenetic lncRNA (lincRNA) 2363 58.5273 2
Osa03LNT0204600.1 3 Osa03LNG0204600 7754762-7763564 long non-coding(lnc) isoforms of known genes 5552 46.05548 11
Osa03LNT0204500.1 3 Osa03LNG0204500 7773866-7779811 long non-coding(lnc) isoforms of known genes 1238 50.40388 5
Osa03LNT0463500.1 3 Osa03LNG0463500 7863536-7863809 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa03LNT0463600.1 3 Osa03LNG0463600 7863536-7863809 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa03LNT0204700.1 3 Osa03LNG0204700 7896546-7901702 intergenetic lncRNA (lincRNA) 1921 54.24258 2
Osa03LNT0204800.2 3 Osa03LNG0204800 7914641-7918255 long non-coding(lnc) isoforms of known genes 3221 45.14126 5
Osa03LNT0204800.1 3 Osa03LNG0204800 7914641-7918255 long non-coding(lnc) isoforms of known genes 1585 55.07886 5
Osa03LNT0463700.1 3 Osa03LNG0463700 7974795-7975056 intergenetic lncRNA (lincRNA) 262 29.77099 1
Osa03LNT0463800.1 3 Osa03LNG0463800 7994938-7995193 intergenetic lncRNA (lincRNA) 256 43.35938 1
Osa03LNT0204900.1 3 Osa03LNG0204900 8047091-8052536 long non-coding(lnc) isoforms of known genes 2105 46.4133 14
Osa03LNT0205000.1 3 Osa03LNG0205000 8067630-8071826 long non-coding(lnc) isoforms of known genes 2446 46.07522 9