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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0563400.1 12 Osa12LNG0563400 17316975-17317190 intergenetic lncRNA (lincRNA) 216 49.53704 1
Osa12LNT0128900.1 12 Osa12LNG0128900 17354041-17358720 intergenetic lncRNA (lincRNA) 540 48.33333 2
Osa12LNT0558500.1 12 Osa12LNG0558500 1743705-1743949 intergenetic lncRNA (lincRNA) 245 26.53061 1
Osa12LNT0129000.1 12 Osa12LNG0129000 17565473-17566048 intergenetic lncRNA (lincRNA) 576 52.08333 1
Osa12LNT0129100.1 12 Osa12LNG0129100 17628056-17632409 long non-coding(lnc) isoforms of known genes 3067 47.89697 3
Osa12LNT0129200.1 12 Osa12LNG0129200 17660372-17661005 intergenetic lncRNA (lincRNA) 634 54.10095 1
Osa12LNT0114900.2 12 Osa12LNG0114900 1772567-1774576 intergenetic lncRNA (lincRNA) 1770 39.60452 3
Osa12LNT0114900.1 12 Osa12LNG0114900 1772567-1774576 intergenetic lncRNA (lincRNA) 1893 40.09509 2
Osa12LNT0115000.1 12 Osa12LNG0115000 1774957-1777703 sense lncRNA 938 52.77186 3
Osa12LNT0129400.1 12 Osa12LNG0129400 17924596-17931646 long non-coding(lnc) isoforms of known genes 2657 44.29808 12
Osa12LNT0129300.1 12 Osa12LNG0129300 17950479-17951211 intergenetic lncRNA (lincRNA) 733 46.38472 1
Osa12LNT0563600.1 12 Osa12LNG0563600 18025719-18025992 intergenetic lncRNA (lincRNA) 274 24.08759 1
Osa12LNT0563500.1 12 Osa12LNG0563500 18025719-18025992 intergenetic lncRNA (lincRNA) 274 24.08759 1
Osa12LNT0115100.1 12 Osa12LNG0115100 1807696-1811160 long non-coding(lnc) isoforms of known genes 1464 49.24863 11
Osa12LNT0129500.1 12 Osa12LNG0129500 18195132-18201528 long non-coding(lnc) isoforms of known genes 900 46.22222 6
Osa12LNT0129600.1 12 Osa12LNG0129600 18311011-18313079 long non-coding(lnc) isoforms of known genes 802 48.50374 4
Osa12LNT0129700.1 12 Osa12LNG0129700 18315197-18319042 long non-coding(lnc) isoforms of known genes 2655 44.93409 5
Osa12LNT0129800.1 12 Osa12LNG0129800 18367415-18368323 intergenetic lncRNA (lincRNA) 909 53.57536 1
Osa12LNT0563700.1 12 Osa12LNG0563700 18438880-18439079 intergenetic lncRNA (lincRNA) 200 47.5 1
Osa12LNT0115200.1 12 Osa12LNG0115200 1855805-1859461 sense lncRNA 1612 50.37221 2
Osa12LNT0563900.1 12 Osa12LNG0563900 18564624-18564896 intergenetic lncRNA (lincRNA) 273 29.30403 1
Osa12LNT0563800.1 12 Osa12LNG0563800 18564624-18564896 intergenetic lncRNA (lincRNA) 273 29.30403 1
Osa12LNT0129900.1 12 Osa12LNG0129900 18721650-18724616 long non-coding(lnc) isoforms of known genes 649 53.77504 3
Osa12LNT0130000.1 12 Osa12LNG0130000 18879433-18882393 long non-coding(lnc) isoforms of known genes 1792 48.4933 5
Osa12LNT0130100.1 12 Osa12LNG0130100 18893090-18896100 intergenetic lncRNA (lincRNA) 1450 45.03448 5