\
RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

filter

Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0255000.1 4 Osa04LNG0255000 12931840-12932512 intergenetic lncRNA (lincRNA) 673 61.06984 1
Osa04LNT0255100.1 4 Osa04LNG0255100 12955648-12958649 long non-coding(lnc) isoforms of known genes 740 48.24324 4
Osa04LNT0255200.1 4 Osa04LNG0255200 13084975-13088777 long non-coding(lnc) isoforms of known genes 1724 47.85383 7
Osa04LNT0255300.1 4 Osa04LNG0255300 13176753-13183064 long non-coding(lnc) isoforms of known genes 2162 48.79741 11
Osa04LNT0255300.2 4 Osa04LNG0255300 13176753-13183064 long non-coding(lnc) isoforms of known genes 2045 49.82885 12
Osa04LNT0246600.1 4 Osa04LNG0246600 1325252-1327635 long non-coding(lnc) isoforms of known genes 502 51.99203 3
Osa04LNT0255400.1 4 Osa04LNG0255400 13252865-13253404 intergenetic lncRNA (lincRNA) 540 58.33333 1
Osa04LNT0255500.1 4 Osa04LNG0255500 13345976-13346196 intergenetic lncRNA (lincRNA) 221 40.72398 1
Osa04LNT0488900.1 4 Osa04LNG0488900 13541959-13542184 intergenetic lncRNA (lincRNA) 226 48.67257 1
Osa04LNT0246800.1 4 Osa04LNG0246800 1358313-1362609 sense lncRNA 3554 42.48734 3
Osa04LNT0255600.1 4 Osa04LNG0255600 13610848-13616446 long non-coding(lnc) isoforms of known genes 1146 45.81152 9
Osa04LNT0255800.2 4 Osa04LNG0255800 13641603-13653688 sense lncRNA 561 61.31907 2
Osa04LNT0255800.1 4 Osa04LNG0255800 13641603-13653688 long non-coding(lnc) isoforms of known genes 2928 49.4194 21
Osa04LNT0255800.3 4 Osa04LNG0255800 13641603-13653688 intronic lncRNA 245 50.61224 2
Osa04LNT0255700.1 4 Osa04LNG0255700 13818100-13820521 long non-coding(lnc) isoforms of known genes 819 67.76557 2
Osa04LNT0255900.1 4 Osa04LNG0255900 13821684-13830207 long non-coding(lnc) isoforms of known genes 2660 45.86466 11
Osa04LNT0255900.2 4 Osa04LNG0255900 13821684-13830207 long non-coding(lnc) isoforms of known genes 2820 44.8227 11
Osa04LNT0489100.1 4 Osa04LNG0489100 13911925-13912186 intergenetic lncRNA (lincRNA) 262 26.71756 1
Osa04LNT0489000.1 4 Osa04LNG0489000 13911925-13912186 intergenetic lncRNA (lincRNA) 262 26.71756 1
Osa04LNT0489300.1 4 Osa04LNG0489300 13912253-13912497 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa04LNT0489200.1 4 Osa04LNG0489200 13912253-13912497 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa04LNT0256000.1 4 Osa04LNG0256000 13926309-13928367 long non-coding(lnc) isoforms of known genes 625 49.28 2
Osa04LNT0489400.1 4 Osa04LNG0489400 13980653-13980912 intergenetic lncRNA (lincRNA) 260 38.46154 1
Osa04LNT0256100.1 4 Osa04LNG0256100 13989151-13997557 long non-coding(lnc) isoforms of known genes 1007 49.65243 6
Osa04LNT0256200.1 4 Osa04LNG0256200 14129273-14129493 intergenetic lncRNA (lincRNA) 221 37.10407 1
Osa04LNT0256300.1 4 Osa04LNG0256300 14132210-14136071 Antisense lncRNA 1681 51.93337 3
Osa04LNT0256400.1 4 Osa04LNG0256400 14134538-14134814 intergenetic lncRNA (lincRNA) 277 43.68231 1
Osa04LNT0246700.1 4 Osa04LNG0246700 1434622-1435074 intergenetic lncRNA (lincRNA) 453 59.60265 1
Osa04LNT0489500.1 4 Osa04LNG0489500 14362227-14362483 intergenetic lncRNA (lincRNA) 257 31.51751 1
Osa04LNT0489600.1 4 Osa04LNG0489600 14362227-14362483 intergenetic lncRNA (lincRNA) 257 31.51751 1
Osa04LNT0256500.1 4 Osa04LNG0256500 14698608-14703870 long non-coding(lnc) isoforms of known genes 2061 45.85153 12
Osa04LNT0256600.1 4 Osa04LNG0256600 14738264-14742552 intergenetic lncRNA (lincRNA) 566 56.89046 2
Osa04LNT0489700.1 4 Osa04LNG0489700 14777492-14777730 intergenetic lncRNA (lincRNA) 239 25.1046 1
Osa04LNT0246900.1 4 Osa04LNG0246900 1482661-1485719 intergenetic lncRNA (lincRNA) 2222 44.9595 3
Osa04LNT0489900.1 4 Osa04LNG0489900 14910836-14911092 intergenetic lncRNA (lincRNA) 257 31.51751 1
Osa04LNT0489800.1 4 Osa04LNG0489800 14910836-14911092 intergenetic lncRNA (lincRNA) 257 31.51751 1
Osa04LNT0490000.1 4 Osa04LNG0490000 15028741-15028970 intergenetic lncRNA (lincRNA) 230 28.26087 1
Osa04LNT0256700.2 4 Osa04LNG0256700 15123073-15126617 long non-coding(lnc) isoforms of known genes 1414 59.6181 3
Osa04LNT0256700.1 4 Osa04LNG0256700 15123073-15126617 long non-coding(lnc) isoforms of known genes 1618 58.65266 4
Osa04LNT0490100.1 4 Osa04LNG0490100 15262280-15262555 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa04LNT0256900.2 4 Osa04LNG0256900 15380871-15398864 long non-coding(lnc) isoforms of known genes 1663 44.61816 10
Osa04LNT0256900.1 4 Osa04LNG0256900 15380871-15398864 long non-coding(lnc) isoforms of known genes 3746 44.39402 15
Osa04LNT0490200.1 4 Osa04LNG0490200 15496077-15496349 intergenetic lncRNA (lincRNA) 273 27.47253 1
Osa04LNT0490300.1 4 Osa04LNG0490300 15496077-15496349 intergenetic lncRNA (lincRNA) 273 27.47253 1
Osa04LNT0256800.1 4 Osa04LNG0256800 15515937-15518553 intergenetic lncRNA (lincRNA) 1031 46.94471 4
Osa04LNT0490400.1 4 Osa04LNG0490400 15570643-15570868 intergenetic lncRNA (lincRNA) 226 48.67257 1
Osa04LNT0247000.1 4 Osa04LNG0247000 1564814-1565084 intronic lncRNA 271 53.13653 1
Osa04LNT0257100.1 4 Osa04LNG0257100 15672109-15683093 long non-coding(lnc) isoforms of known genes 1393 43.79038 10
Osa04LNT0257000.1 4 Osa04LNG0257000 15711262-15712501 intergenetic lncRNA (lincRNA) 906 36.42384 2
Osa04LNT0490500.1 4 Osa04LNG0490500 15733461-15733686 intergenetic lncRNA (lincRNA) 226 48.23009 1