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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0134000.1 12 Osa12LNG0134000 22530250-22535023 long non-coding(lnc) isoforms of known genes 2160 51.2963 7
Osa12LNT0134100.1 12 Osa12LNG0134100 22723237-22726823 long non-coding(lnc) isoforms of known genes 3335 48.51574 3
Osa12LNT0134200.1 12 Osa12LNG0134200 22782338-22785768 long non-coding(lnc) isoforms of known genes 2043 47.13656 5
Osa12LNT0566000.1 12 Osa12LNG0566000 22828746-22829020 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0566100.1 12 Osa12LNG0566100 22828746-22829020 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0115700.1 12 Osa12LNG0115700 2285050-2287399 sense lncRNA 640 39.53125 2
Osa12LNT0134300.1 12 Osa12LNG0134300 22947734-22951075 long non-coding(lnc) isoforms of known genes 1232 53.8961 3
Osa12LNT0134400.1 12 Osa12LNG0134400 22969436-22972367 sense lncRNA 547 49.54296 2
Osa12LNT0134600.1 12 Osa12LNG0134600 22972925-22976141 long non-coding(lnc) isoforms of known genes 2226 50.9434 7
Osa12LNT0134500.1 12 Osa12LNG0134500 23000063-23001479 sense lncRNA 1246 51.76565 2
Osa12LNT0558800.1 12 Osa12LNG0558800 2307313-2307567 intronic lncRNA 255 28.62745 1
Osa12LNT0134700.1 12 Osa12LNG0134700 23135061-23137352 sense lncRNA 1299 52.27098 3
Osa12LNT0134900.1 12 Osa12LNG0134900 23157167-23164663 long non-coding(lnc) isoforms of known genes 3940 43.4264 13
Osa12LNT0135000.1 12 Osa12LNG0135000 23157388-23160048 long non-coding(lnc) isoforms of known genes 2141 42.26997 5
Osa12LNT0134800.1 12 Osa12LNG0134800 23167007-23171932 long non-coding(lnc) isoforms of known genes 3477 42.65171 3
Osa12LNT0566200.1 12 Osa12LNG0566200 23232839-23233094 intergenetic lncRNA (lincRNA) 256 28.125 1
Osa12LNT0135100.1 12 Osa12LNG0135100 23256135-23258644 long non-coding(lnc) isoforms of known genes 680 46.76471 5
Osa12LNT0135200.1 12 Osa12LNG0135200 23302326-23306289 long non-coding(lnc) isoforms of known genes 1687 51.9265 10
Osa12LNT0135400.1 12 Osa12LNG0135400 23307980-23312202 long non-coding(lnc) isoforms of known genes 1730 50.52023 10
Osa12LNT0135300.1 12 Osa12LNG0135300 23325673-23327055 long non-coding(lnc) isoforms of known genes 1294 47.75889 2
Osa12LNT0566300.1 12 Osa12LNG0566300 23380625-23380875 intergenetic lncRNA (lincRNA) 251 26.69323 1
Osa12LNT0566400.1 12 Osa12LNG0566400 23380625-23380875 intergenetic lncRNA (lincRNA) 251 26.69323 1
Osa12LNT0135500.1 12 Osa12LNG0135500 23439985-23440626 intergenetic lncRNA (lincRNA) 642 48.2866 1
Osa12LNT0566500.1 12 Osa12LNG0566500 23505800-23506027 intergenetic lncRNA (lincRNA) 228 49.5614 1
Osa12LNT0135600.1 12 Osa12LNG0135600 23584169-23593482 long non-coding(lnc) isoforms of known genes 1222 53.68249 9