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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0137000.1 12 Osa12LNG0137000 25536231-25544911 long non-coding(lnc) isoforms of known genes 5350 51.73832 6
Osa12LNT0567500.1 12 Osa12LNG0567500 25667176-25667448 intergenetic lncRNA (lincRNA) 273 26.37363 1
Osa12LNT0567400.1 12 Osa12LNG0567400 25667176-25667448 intergenetic lncRNA (lincRNA) 273 26.37363 1
Osa12LNT0137100.1 12 Osa12LNG0137100 25702141-25706956 long non-coding(lnc) isoforms of known genes 2248 46.84164 11
Osa12LNT0137200.1 12 Osa12LNG0137200 25812404-25814776 sense lncRNA 2255 38.44789 2
Osa12LNT0567600.1 12 Osa12LNG0567600 25820180-25820417 intergenetic lncRNA (lincRNA) 238 29.83193 1
Osa12LNT0137300.2 12 Osa12LNG0137300 25820882-25824643 long non-coding(lnc) isoforms of known genes 1665 45.40541 7
Osa12LNT0137300.1 12 Osa12LNG0137300 25820882-25824643 long non-coding(lnc) isoforms of known genes 2176 43.15257 7
Osa12LNT0116000.1 12 Osa12LNG0116000 2587283-2587861 intergenetic lncRNA (lincRNA) 579 37.3057 1
Osa12LNT0567700.1 12 Osa12LNG0567700 25899150-25899403 intergenetic lncRNA (lincRNA) 254 28.34646 1
Osa12LNT0137400.1 12 Osa12LNG0137400 25911188-25914635 long non-coding(lnc) isoforms of known genes 2817 48.5978 3
Osa12LNT0116100.1 12 Osa12LNG0116100 2592147-2594898 sense lncRNA 2658 49.73664 2
Osa12LNT0567800.1 12 Osa12LNG0567800 25951019-25951270 intergenetic lncRNA (lincRNA) 252 47.61905 1
Osa12LNT0137500.1 12 Osa12LNG0137500 25953474-25957331 long non-coding(lnc) isoforms of known genes 1957 43.63822 5
Osa12LNT0137600.1 12 Osa12LNG0137600 25965112-25976050 long non-coding(lnc) isoforms of known genes 5912 43.1157 19
Osa12LNT0137700.1 12 Osa12LNG0137700 26002370-26008343 long non-coding(lnc) isoforms of known genes 3887 49.70414 14
Osa12LNT0116200.1 12 Osa12LNG0116200 2600996-2602026 sense lncRNA 447 47.42729 2
Osa12LNT0137800.2 12 Osa12LNG0137800 26104095-26109736 long non-coding(lnc) isoforms of known genes 2341 46.47587 19
Osa12LNT0137800.1 12 Osa12LNG0137800 26104095-26109736 long non-coding(lnc) isoforms of known genes 2388 43.59296 10
Osa12LNT0137800.3 12 Osa12LNG0137800 26104095-26109736 long non-coding(lnc) isoforms of known genes 2150 43.44186 9
Osa12LNT0137800.4 12 Osa12LNG0137800 26104095-26109736 long non-coding(lnc) isoforms of known genes 2058 43.73178 10
Osa12LNT0567900.1 12 Osa12LNG0567900 26258108-26258312 intergenetic lncRNA (lincRNA) 205 23.90244 1
Osa12LNT0137900.1 12 Osa12LNG0137900 26300176-26306140 long non-coding(lnc) isoforms of known genes 2990 48.69565 18
Osa12LNT0138000.1 12 Osa12LNG0138000 26448177-26448697 intergenetic lncRNA (lincRNA) 521 49.32821 1
Osa12LNT0138100.1 12 Osa12LNG0138100 26502398-26504588 long non-coding(lnc) isoforms of known genes 2112 44.27083 2