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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0023300.1 1 Osa01LNG0023300 20464727-20469249 long non-coding(lnc) isoforms of known genes 3201 47.64136 6
Osa01LNT0023400.1 1 Osa01LNG0023400 20489229-20501754 long non-coding(lnc) isoforms of known genes 2621 47.00496 19
Osa01LNT0023400.2 1 Osa01LNG0023400 20489229-20501754 long non-coding(lnc) isoforms of known genes 2644 46.78517 19
Osa01LNT0023700.1 1 Osa01LNG0023700 20717034-20727200 long non-coding(lnc) isoforms of known genes 5250 41.25714 15
Osa01LNT0023800.1 1 Osa01LNG0023800 20726005-20730085 long non-coding(lnc) isoforms of known genes 2773 49.87378 3
Osa01LNT0023500.2 1 Osa01LNG0023500 20731076-20733672 intergenetic lncRNA (lincRNA) 1596 41.91729 4
Osa01LNT0023500.1 1 Osa01LNG0023500 20731076-20733672 intergenetic lncRNA (lincRNA) 2061 40.65987 3
Osa01LNT0023600.1 1 Osa01LNG0023600 20746789-20750441 long non-coding(lnc) isoforms of known genes 2308 45.01733 4
Osa01LNT0002300.1 1 Osa01LNG0002300 2074795-2077891 long non-coding(lnc) isoforms of known genes 2310 49.17749 6
Osa01LNT0023900.1 1 Osa01LNG0023900 20950272-20955520 long non-coding(lnc) isoforms of known genes 1246 53.77207 5
Osa01LNT0024000.1 1 Osa01LNG0024000 21038211-21039165 Antisense lncRNA 770 49.74026 2
Osa01LNT0454400.1 1 Osa01LNG0454400 2130008-2130240 intergenetic lncRNA (lincRNA) 233 23.17597 1
Osa01LNT0024400.1 1 Osa01LNG0024400 21414031-21414589 intergenetic lncRNA (lincRNA) 559 44.36494 1
Osa01LNT0024100.1 1 Osa01LNG0024100 21447489-21450077 long non-coding(lnc) isoforms of known genes 1000 49.7 5
Osa01LNT0024200.1 1 Osa01LNG0024200 21534121-21537684 long non-coding(lnc) isoforms of known genes 1068 50.37453 6
Osa01LNT0024300.1 1 Osa01LNG0024300 21623761-21626735 long non-coding(lnc) isoforms of known genes 848 54.83491 5
Osa01LNT0024500.1 1 Osa01LNG0024500 21637202-21643059 long non-coding(lnc) isoforms of known genes 2609 48.8693 4
Osa01LNT0024600.1 1 Osa01LNG0024600 21687373-21689620 sense lncRNA 2139 61.57083 2
Osa01LNT0024700.1 1 Osa01LNG0024700 21922198-21923969 sense lncRNA 1312 41.23476 2
Osa01LNT0024800.2 1 Osa01LNG0024800 22021849-22027269 long non-coding(lnc) isoforms of known genes 1869 52.86249 7
Osa01LNT0024800.1 1 Osa01LNG0024800 22021849-22027269 long non-coding(lnc) isoforms of known genes 1808 53.20796 7
Osa01LNT0024900.1 1 Osa01LNG0024900 22088204-22091018 long non-coding(lnc) isoforms of known genes 1257 55.13126 11
Osa01LNT0025000.1 1 Osa01LNG0025000 22423500-22423747 intergenetic lncRNA (lincRNA) 248 61.29032 1
Osa01LNT0025100.1 1 Osa01LNG0025100 22439040-22441966 long non-coding(lnc) isoforms of known genes 1412 43.4136 8
Osa01LNT0025100.2 1 Osa01LNG0025100 22439040-22441966 long non-coding(lnc) isoforms of known genes 1299 43.64896 8