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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0139100.1 12 Osa12LNG0139100 27514136-27529682 long non-coding(lnc) isoforms of known genes 5064 45.30016 22
Osa12LNT0116500.1 12 Osa12LNG0116500 2835581-2840683 sense lncRNA 945 48.99471 3
Osa12LNT0558900.1 12 Osa12LNG0558900 2847416-2847625 intergenetic lncRNA (lincRNA) 210 34.28571 1
Osa12LNT0116600.1 12 Osa12LNG0116600 2851930-2856262 long non-coding(lnc) isoforms of known genes 1529 49.70569 8
Osa12LNT0116700.1 12 Osa12LNG0116700 2984590-2984836 intergenetic lncRNA (lincRNA) 247 37.24696 1
Osa12LNT0116800.1 12 Osa12LNG0116800 2986536-2993307 long non-coding(lnc) isoforms of known genes 2550 46.31373 12
Osa12LNT0112000.1 12 Osa12LNG0112000 306553-310706 long non-coding(lnc) isoforms of known genes 2537 46.35396 11
Osa12LNT0116900.1 12 Osa12LNG0116900 3092879-3093791 intergenetic lncRNA (lincRNA) 913 44.79737 1
Osa12LNT0117000.1 12 Osa12LNG0117000 3100904-3110416 long non-coding(lnc) isoforms of known genes 2590 46.37066 5
Osa12LNT0117100.1 12 Osa12LNG0117100 3118084-3124832 long non-coding(lnc) isoforms of known genes 3088 44.81865 6
Osa12LNT0112100.1 12 Osa12LNG0112100 315343-318555 long non-coding(lnc) isoforms of known genes 1423 49.3324 5
Osa12LNT0117200.1 12 Osa12LNG0117200 3179975-3184783 long non-coding(lnc) isoforms of known genes 4246 45.40744 2
Osa12LNT0117300.1 12 Osa12LNG0117300 3187804-3190071 long non-coding(lnc) isoforms of known genes 1002 57.28543 5
Osa12LNT0117400.1 12 Osa12LNG0117400 3219107-3222884 long non-coding(lnc) isoforms of known genes 3340 41.10778 2
Osa12LNT0117500.1 12 Osa12LNG0117500 3296798-3302844 long non-coding(lnc) isoforms of known genes 3070 48.82736 14
Osa12LNT0117500.2 12 Osa12LNG0117500 3296798-3302844 long non-coding(lnc) isoforms of known genes 3078 48.83041 14
Osa12LNT0117600.1 12 Osa12LNG0117600 3402727-3407039 long non-coding(lnc) isoforms of known genes 3175 44.0 8
Osa12LNT0117700.1 12 Osa12LNG0117700 3449529-3454055 long non-coding(lnc) isoforms of known genes 1493 49.29672 5
Osa12LNT0117800.2 12 Osa12LNG0117800 3503125-3509255 long non-coding(lnc) isoforms of known genes 2902 51.82633 18
Osa12LNT0117800.1 12 Osa12LNG0117800 3503125-3509255 long non-coding(lnc) isoforms of known genes 2163 55.66343 18
Osa12LNT0117900.1 12 Osa12LNG0117900 3527480-3528162 intergenetic lncRNA (lincRNA) 683 60.76135 1
Osa12LNT0118000.1 12 Osa12LNG0118000 3531395-3536426 long non-coding(lnc) isoforms of known genes 2193 50.114 13
Osa12LNT0118100.1 12 Osa12LNG0118100 3567096-3571971 long non-coding(lnc) isoforms of known genes 2860 43.42657 3
Osa12LNT0118100.2 12 Osa12LNG0118100 3567096-3571971 long non-coding(lnc) isoforms of known genes 2330 46.56652 4
Osa12LNT0118200.1 12 Osa12LNG0118200 3782048-3782479 intergenetic lncRNA (lincRNA) 432 53.24074 1