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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0118300.1 12 Osa12LNG0118300 3861470-3863929 long non-coding(lnc) isoforms of known genes 1470 58.09524 4
Osa12LNT0558200.1 12 Osa12LNG0558200 395314-395515 intergenetic lncRNA (lincRNA) 202 38.11881 1
Osa12LNT0118400.1 12 Osa12LNG0118400 4032261-4036962 long non-coding(lnc) isoforms of known genes 1676 45.22673 11
Osa12LNT0118500.1 12 Osa12LNG0118500 4074810-4080689 long non-coding(lnc) isoforms of known genes 1026 53.89864 9
Osa12LNT0118500.4 12 Osa12LNG0118500 4074810-4080689 long non-coding(lnc) isoforms of known genes 1159 54.78861 8
Osa12LNT0118500.3 12 Osa12LNG0118500 4074810-4080689 long non-coding(lnc) isoforms of known genes 1339 53.24869 6
Osa12LNT0118500.2 12 Osa12LNG0118500 4074810-4080689 long non-coding(lnc) isoforms of known genes 1273 53.49568 7
Osa12LNT0118700.1 12 Osa12LNG0118700 4144916-4146539 long non-coding(lnc) isoforms of known genes 1520 65.19737 2
Osa12LNT0118600.1 12 Osa12LNG0118600 4157056-4157542 intergenetic lncRNA (lincRNA) 487 43.12115 1
Osa12LNT0118800.1 12 Osa12LNG0118800 4213109-4213806 long non-coding(lnc) isoforms of known genes 509 40.86444 3
Osa12LNT0118900.1 12 Osa12LNG0118900 4216583-4219627 long non-coding(lnc) isoforms of known genes 1529 51.34075 8
Osa12LNT0559000.1 12 Osa12LNG0559000 4227303-4227577 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0559100.1 12 Osa12LNG0559100 4227303-4227577 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0559200.1 12 Osa12LNG0559200 4227645-4227889 intergenetic lncRNA (lincRNA) 245 24.89796 1
Osa12LNT0112200.1 12 Osa12LNG0112200 439128-443649 long non-coding(lnc) isoforms of known genes 2549 45.15496 9
Osa12LNT0119000.1 12 Osa12LNG0119000 4461920-4462965 sense lncRNA 752 54.65426 2
Osa12LNT0559300.1 12 Osa12LNG0559300 4592494-4592767 intergenetic lncRNA (lincRNA) 274 24.81752 1
Osa12LNT0559400.1 12 Osa12LNG0559400 4592494-4592767 intergenetic lncRNA (lincRNA) 274 24.81752 1
Osa12LNT0119100.2 12 Osa12LNG0119100 4635104-4638407 long non-coding(lnc) isoforms of known genes 2524 44.33439 3
Osa12LNT0119100.1 12 Osa12LNG0119100 4635104-4638407 long non-coding(lnc) isoforms of known genes 2073 46.84033 3
Osa12LNT0559500.1 12 Osa12LNG0559500 4638882-4639155 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa12LNT0559600.1 12 Osa12LNG0559600 4638882-4639155 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa12LNT0119200.1 12 Osa12LNG0119200 4814597-4818499 long non-coding(lnc) isoforms of known genes 1927 43.27971 6
Osa12LNT0119300.1 12 Osa12LNG0119300 4952852-4957620 sense lncRNA 285 47.7193 2
Osa12LNT0119400.1 12 Osa12LNG0119400 5042596-5044626 long non-coding(lnc) isoforms of known genes 1801 39.92227 3