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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0119400.2 12 Osa12LNG0119400 5042596-5044626 long non-coding(lnc) isoforms of known genes 1347 42.09354 6
Osa12LNT0119500.1 12 Osa12LNG0119500 5099050-5102457 long non-coding(lnc) isoforms of known genes 2777 47.20922 4
Osa12LNT0119600.1 12 Osa12LNG0119600 5165422-5168654 intergenetic lncRNA (lincRNA) 2914 39.91078 4
Osa12LNT0112300.1 12 Osa12LNG0112300 535944-540335 long non-coding(lnc) isoforms of known genes 3293 48.70938 4
Osa12LNT0119700.2 12 Osa12LNG0119700 5391987-5394918 long non-coding(lnc) isoforms of known genes 1517 51.08767 9
Osa12LNT0119700.1 12 Osa12LNG0119700 5391987-5394918 long non-coding(lnc) isoforms of known genes 1522 51.05125 9
Osa12LNT0559700.1 12 Osa12LNG0559700 5493332-5493542 intergenetic lncRNA (lincRNA) 211 45.97156 1
Osa12LNT0119800.1 12 Osa12LNG0119800 5644778-5645645 intergenetic lncRNA (lincRNA) 868 38.82488 1
Osa12LNT0119900.1 12 Osa12LNG0119900 5657060-5658186 intergenetic lncRNA (lincRNA) 1127 35.315 1
Osa12LNT0120000.1 12 Osa12LNG0120000 5747608-5749538 intergenetic lncRNA (lincRNA) 1541 40.94744 2
Osa12LNT0559800.1 12 Osa12LNG0559800 5781305-5781549 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa12LNT0559900.1 12 Osa12LNG0559900 5781305-5781549 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa12LNT0120100.1 12 Osa12LNG0120100 5855232-5855620 intergenetic lncRNA (lincRNA) 298 59.0604 2
Osa12LNT0112400.1 12 Osa12LNG0112400 616537-617614 long non-coding(lnc) isoforms of known genes 644 46.58385 3
Osa12LNT0120200.1 12 Osa12LNG0120200 6399037-6399620 intergenetic lncRNA (lincRNA) 584 47.26027 1
Osa12LNT0560000.1 12 Osa12LNG0560000 6514247-6514521 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0560100.1 12 Osa12LNG0560100 6514247-6514521 intergenetic lncRNA (lincRNA) 275 26.54545 1
Osa12LNT0120300.1 12 Osa12LNG0120300 6549518-6550237 intergenetic lncRNA (lincRNA) 720 45.0 1
Osa12LNT0120400.1 12 Osa12LNG0120400 6567109-6567792 intergenetic lncRNA (lincRNA) 684 45.46784 1
Osa12LNT0560200.1 12 Osa12LNG0560200 6578056-6578310 intergenetic lncRNA (lincRNA) 255 28.23529 1
Osa12LNT0120500.1 12 Osa12LNG0120500 6729606-6734439 long non-coding(lnc) isoforms of known genes 2918 50.17135 8
Osa12LNT0560300.1 12 Osa12LNG0560300 6743910-6744123 intergenetic lncRNA (lincRNA) 214 58.41121 1
Osa12LNT0120600.1 12 Osa12LNG0120600 6799622-6806553 long non-coding(lnc) isoforms of known genes 1453 47.96972 10
Osa12LNT0120700.1 12 Osa12LNG0120700 6892315-6893811 intronic lncRNA 715 42.51748 6
Osa12LNT0120700.3 12 Osa12LNG0120700 6892315-6893811 intronic lncRNA 737 42.33379 6