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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa12LNT0112800.1 12 Osa12LNG0112800 833844-835277 intergenetic lncRNA (lincRNA) 751 39.81358 2
Osa12LNT0560900.1 12 Osa12LNG0560900 8498701-8498948 intergenetic lncRNA (lincRNA) 248 27.01613 1
Osa12LNT0561000.1 12 Osa12LNG0561000 8498701-8498948 intergenetic lncRNA (lincRNA) 248 27.01613 1
Osa12LNT0561200.1 12 Osa12LNG0561200 8499853-8500126 intergenetic lncRNA (lincRNA) 274 22.9927 1
Osa12LNT0561100.1 12 Osa12LNG0561100 8499853-8500126 intergenetic lncRNA (lincRNA) 274 22.9927 1
Osa12LNT0122200.1 12 Osa12LNG0122200 8670057-8679483 long non-coding(lnc) isoforms of known genes 3389 44.43789 7
Osa12LNT0122200.2 12 Osa12LNG0122200 8670057-8679483 long non-coding(lnc) isoforms of known genes 2376 43.01347 6
Osa12LNT0122300.2 12 Osa12LNG0122300 8695284-8699390 long non-coding(lnc) isoforms of known genes 1948 41.63244 4
Osa12LNT0122300.1 12 Osa12LNG0122300 8695284-8699390 long non-coding(lnc) isoforms of known genes 987 50.45593 4
Osa12LNT0122400.1 12 Osa12LNG0122400 8726067-8737949 long non-coding(lnc) isoforms of known genes 2360 42.62712 10
Osa12LNT0122600.3 12 Osa12LNG0122600 8809699-8818252 long non-coding(lnc) isoforms of known genes 1085 56.03687 2
Osa12LNT0122600.2 12 Osa12LNG0122600 8809699-8818252 long non-coding(lnc) isoforms of known genes 1190 54.53782 3
Osa12LNT0122600.1 12 Osa12LNG0122600 8809699-8818252 sense lncRNA 1970 45.7868 2
Osa12LNT0122500.2 12 Osa12LNG0122500 8823330-8826763 sense lncRNA 3001 43.71876 3
Osa12LNT0122500.1 12 Osa12LNG0122500 8823330-8826763 sense lncRNA 3344 42.49402 2
Osa12LNT0113000.3 12 Osa12LNG0113000 917265-927893 long non-coding(lnc) isoforms of known genes 2187 47.23365 6
Osa12LNT0113000.1 12 Osa12LNG0113000 917265-927893 long non-coding(lnc) isoforms of known genes 2508 47.96651 7
Osa12LNT0113000.2 12 Osa12LNG0113000 917265-927893 long non-coding(lnc) isoforms of known genes 2353 46.79133 7
Osa12LNT0122700.1 12 Osa12LNG0122700 9263613-9270109 long non-coding(lnc) isoforms of known genes 2069 47.26921 12
Osa12LNT0122800.1 12 Osa12LNG0122800 9286790-9291493 long non-coding(lnc) isoforms of known genes 1217 49.21939 5
Osa12LNT0122800.2 12 Osa12LNG0122800 9286790-9291493 long non-coding(lnc) isoforms of known genes 959 49.63504 4
Osa12LNT0122900.2 12 Osa12LNG0122900 9303179-9318103 long non-coding(lnc) isoforms of known genes 8700 41.36782 16
Osa12LNT0122900.1 12 Osa12LNG0122900 9303179-9318103 long non-coding(lnc) isoforms of known genes 8284 41.33269 17
Osa12LNT0123000.1 12 Osa12LNG0123000 9371225-9373404 long non-coding(lnc) isoforms of known genes 1032 51.93798 3
Osa12LNT0123100.1 12 Osa12LNG0123100 9466296-9468196 sense lncRNA 652 55.06135 2