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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0000100.1 1 Osa01LNG0000100 224917-225649 intergenetic lncRNA (lincRNA) 733 57.02592 1
Osa01LNT0459200.1 1 Osa01LNG0459200 22521864-22522077 intergenetic lncRNA (lincRNA) 214 40.18692 1
Osa01LNT0459300.1 1 Osa01LNG0459300 22522592-22522836 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa01LNT0025200.1 1 Osa01LNG0025200 22556276-22561372 long non-coding(lnc) isoforms of known genes 2631 43.86165 4
Osa01LNT0025200.2 1 Osa01LNG0025200 22556276-22561372 long non-coding(lnc) isoforms of known genes 2545 44.36149 4
Osa01LNT0025300.1 1 Osa01LNG0025300 22591434-22596157 long non-coding(lnc) isoforms of known genes 1859 48.09037 11
Osa01LNT0002400.3 1 Osa01LNG0002400 2266353-2271044 long non-coding(lnc) isoforms of known genes 2457 45.38055 12
Osa01LNT0002400.1 1 Osa01LNG0002400 2266353-2271044 long non-coding(lnc) isoforms of known genes 2469 45.5245 12
Osa01LNT0002400.2 1 Osa01LNG0002400 2266353-2271044 long non-coding(lnc) isoforms of known genes 2100 46.14286 13
Osa01LNT0025400.1 1 Osa01LNG0025400 22820253-22823095 long non-coding(lnc) isoforms of known genes 1759 48.49346 6
Osa01LNT0454500.1 1 Osa01LNG0454500 2310102-2310319 intergenetic lncRNA (lincRNA) 218 39.90826 1
Osa01LNT0025500.1 1 Osa01LNG0025500 23163385-23168478 sense lncRNA 263 49.80989 2
Osa01LNT0025600.1 1 Osa01LNG0025600 23224373-23226605 long non-coding(lnc) isoforms of known genes 629 43.87917 3
Osa01LNT0459400.1 1 Osa01LNG0459400 23310233-23310507 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa01LNT0025700.1 1 Osa01LNG0025700 23431338-23438126 intergenetic lncRNA (lincRNA) 968 42.66529 3
Osa01LNT0459500.1 1 Osa01LNG0459500 23560703-23560940 intergenetic lncRNA (lincRNA) 238 27.31092 1
Osa01LNT0025800.1 1 Osa01LNG0025800 23584039-23585690 sense lncRNA 1310 56.10687 2
Osa01LNT0025900.1 1 Osa01LNG0025900 23644840-23646066 intergenetic lncRNA (lincRNA) 1034 47.58221 2
Osa01LNT0026000.1 1 Osa01LNG0026000 23673178-23675011 long non-coding(lnc) isoforms of known genes 1236 45.38835 3
Osa01LNT0026100.1 1 Osa01LNG0026100 23682750-23685395 long non-coding(lnc) isoforms of known genes 1242 57.40741 4
Osa01LNT0026200.1 1 Osa01LNG0026200 23815187-23819246 long non-coding(lnc) isoforms of known genes 1348 46.81009 10
Osa01LNT0002500.1 1 Osa01LNG0002500 2388605-2390483 long non-coding(lnc) isoforms of known genes 1448 46.20166 4
Osa01LNT0026300.1 1 Osa01LNG0026300 24046254-24048735 sense lncRNA 2351 43.21565 2
Osa01LNT0026300.2 1 Osa01LNG0026300 24046254-24048735 sense lncRNA 1032 50.0969 2
Osa01LNT0026400.1 1 Osa01LNG0026400 24124897-24125515 intergenetic lncRNA (lincRNA) 619 46.84976 1