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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0477500.1 2 Osa02LNG0477500 16350768-16351060 intergenetic lncRNA (lincRNA) 293 25.93857 1
Osa02LNT0477600.1 2 Osa02LNG0477600 16350768-16351060 intergenetic lncRNA (lincRNA) 293 25.93857 1
Osa02LNT0163500.1 2 Osa02LNG0163500 16360196-16365719 long non-coding(lnc) isoforms of known genes 2959 41.5681 11
Osa02LNT0163500.2 2 Osa02LNG0163500 16360196-16365719 long non-coding(lnc) isoforms of known genes 2687 41.79382 12
Osa02LNT0163600.2 2 Osa02LNG0163600 16397777-16401620 sense lncRNA 3307 41.94134 3
Osa02LNT0163600.1 2 Osa02LNG0163600 16397777-16401620 sense lncRNA 1644 50.24331 3
Osa02LNT0163700.1 2 Osa02LNG0163700 16464965-16468482 sense lncRNA 1694 48.7013 2
Osa02LNT0163800.1 2 Osa02LNG0163800 16493375-16502221 long non-coding(lnc) isoforms of known genes 2336 52.05479 12
Osa02LNT0477800.1 2 Osa02LNG0477800 16512375-16512623 intergenetic lncRNA (lincRNA) 249 27.71084 1
Osa02LNT0477700.1 2 Osa02LNG0477700 16512375-16512623 intergenetic lncRNA (lincRNA) 249 27.71084 1
Osa02LNT0143500.1 2 Osa02LNG0143500 1652110-1655309 long non-coding(lnc) isoforms of known genes 1785 52.15686 9
Osa02LNT0143500.2 2 Osa02LNG0143500 1652110-1655309 long non-coding(lnc) isoforms of known genes 1969 54.54545 9
Osa02LNT0477900.1 2 Osa02LNG0477900 16599465-16599708 intergenetic lncRNA (lincRNA) 244 27.45902 1
Osa02LNT0163900.1 2 Osa02LNG0163900 16602669-16612245 long non-coding(lnc) isoforms of known genes 3240 44.04321 14
Osa02LNT0163900.2 2 Osa02LNG0163900 16602669-16612245 long non-coding(lnc) isoforms of known genes 3368 41.27078 13
Osa02LNT0143600.1 2 Osa02LNG0143600 1667427-1671823 long non-coding(lnc) isoforms of known genes 2869 44.09202 7
Osa02LNT0478000.1 2 Osa02LNG0478000 16696732-16696956 intergenetic lncRNA (lincRNA) 225 25.33333 1
Osa02LNT0478200.1 2 Osa02LNG0478200 16803683-16803957 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa02LNT0478100.1 2 Osa02LNG0478100 16803683-16803957 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa02LNT0478300.1 2 Osa02LNG0478300 16956408-16956663 intergenetic lncRNA (lincRNA) 256 23.82812 1
Osa02LNT0478400.1 2 Osa02LNG0478400 16956408-16956663 intergenetic lncRNA (lincRNA) 256 23.82812 1
Osa02LNT0164000.1 2 Osa02LNG0164000 17046466-17047786 long non-coding(lnc) isoforms of known genes 1107 42.36676 3
Osa02LNT0164000.3 2 Osa02LNG0164000 17046466-17047786 long non-coding(lnc) isoforms of known genes 564 44.32624 3
Osa02LNT0164000.2 2 Osa02LNG0164000 17046466-17047786 long non-coding(lnc) isoforms of known genes 1196 39.38127 3
Osa02LNT0164100.1 2 Osa02LNG0164100 17046808-17058399 long non-coding(lnc) isoforms of known genes 2866 44.62666 28