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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0317600.2 5 Osa05LNG0317600 25922422-25926084 long non-coding(lnc) isoforms of known genes 4374 40.39781 7
Osa05LNT0317600.1 5 Osa05LNG0317600 25922422-25926084 long non-coding(lnc) isoforms of known genes 1452 48.27824 10
Osa05LNT0317700.1 5 Osa05LNG0317700 26096071-26099189 long non-coding(lnc) isoforms of known genes 1625 49.72308 5
Osa05LNT0317800.1 5 Osa05LNG0317800 26237497-26245891 long non-coding(lnc) isoforms of known genes 3699 50.04055 14
Osa05LNT0293700.1 5 Osa05LNG0293700 2625815-2630378 long non-coding(lnc) isoforms of known genes 2004 47.60479 12
Osa05LNT0317900.1 5 Osa05LNG0317900 26322392-26326304 long non-coding(lnc) isoforms of known genes 1590 47.42138 9
Osa05LNT0318000.1 5 Osa05LNG0318000 26347162-26351609 long non-coding(lnc) isoforms of known genes 2064 45.83333 11
Osa05LNT0290500.1 5 Osa05LNG0290500 263744-266323 long non-coding(lnc) isoforms of known genes 1152 47.30903 8
Osa05LNT0318100.1 5 Osa05LNG0318100 26396141-26396789 intergenetic lncRNA (lincRNA) 649 46.84129 1
Osa05LNT0318200.1 5 Osa05LNG0318200 26418688-26422465 long non-coding(lnc) isoforms of known genes 1677 50.02982 9
Osa05LNT0318200.2 5 Osa05LNG0318200 26418688-26422465 long non-coding(lnc) isoforms of known genes 1681 50.02974 9
Osa05LNT0318300.1 5 Osa05LNG0318300 26596452-26602014 long non-coding(lnc) isoforms of known genes 2710 41.14391 10
Osa05LNT0318400.1 5 Osa05LNG0318400 26634885-26640861 long non-coding(lnc) isoforms of known genes 2357 46.16037 15
Osa05LNT0318700.1 5 Osa05LNG0318700 26705076-26708198 long non-coding(lnc) isoforms of known genes 1934 56.77353 4
Osa05LNT0293800.1 5 Osa05LNG0293800 2672369-2678630 long non-coding(lnc) isoforms of known genes 2063 44.6922 11
Osa05LNT0520800.1 5 Osa05LNG0520800 26739461-26739735 Antisense lncRNA 275 25.09091 1
Osa05LNT0520900.1 5 Osa05LNG0520900 26739461-26739735 Antisense lncRNA 275 25.09091 1
Osa05LNT0318500.1 5 Osa05LNG0318500 26794411-26801239 long non-coding(lnc) isoforms of known genes 3223 41.76233 18
Osa05LNT0290600.1 5 Osa05LNG0290600 267986-278127 long non-coding(lnc) isoforms of known genes 3604 45.78246 12
Osa05LNT0318600.2 5 Osa05LNG0318600 26815665-26818731 long non-coding(lnc) isoforms of known genes 1197 54.38596 4
Osa05LNT0318600.1 5 Osa05LNG0318600 26815665-26818731 long non-coding(lnc) isoforms of known genes 1184 54.72973 4
Osa05LNT0318800.1 5 Osa05LNG0318800 26846176-26847985 sense lncRNA 1701 52.32216 2
Osa05LNT0318900.1 5 Osa05LNG0318900 26902013-26905007 long non-coding(lnc) isoforms of known genes 764 51.3089 4
Osa05LNT0319100.1 5 Osa05LNG0319100 26911172-26914749 long non-coding(lnc) isoforms of known genes 2033 43.53173 4
Osa05LNT0319100.2 5 Osa05LNG0319100 26911172-26914749 long non-coding(lnc) isoforms of known genes 2011 43.61014 4
Osa05LNT0319000.1 5 Osa05LNG0319000 26921087-26923380 long non-coding(lnc) isoforms of known genes 644 42.85714 4
Osa05LNT0319200.1 5 Osa05LNG0319200 26966645-26969821 long non-coding(lnc) isoforms of known genes 1443 49.41095 11
Osa05LNT0319400.1 5 Osa05LNG0319400 26995748-26999172 long non-coding(lnc) isoforms of known genes 1876 47.28145 6
Osa05LNT0319300.1 5 Osa05LNG0319300 27036923-27039229 long non-coding(lnc) isoforms of known genes 779 44.28755 4
Osa05LNT0319500.1 5 Osa05LNG0319500 27163275-27166806 long non-coding(lnc) isoforms of known genes 1064 47.93233 6
Osa05LNT0319600.1 5 Osa05LNG0319600 27224856-27227332 long non-coding(lnc) isoforms of known genes 777 54.69755 5
Osa05LNT0319700.1 5 Osa05LNG0319700 27236794-27243388 long non-coding(lnc) isoforms of known genes 2348 48.63714 13
Osa05LNT0319800.1 5 Osa05LNG0319800 27310808-27314759 long non-coding(lnc) isoforms of known genes 1360 51.02941 8
Osa05LNT0293900.1 5 Osa05LNG0293900 2737045-2737565 Antisense lncRNA 294 40.47619 2
Osa05LNT0320000.1 5 Osa05LNG0320000 27383444-27387674 long non-coding(lnc) isoforms of known genes 3403 48.92742 5
Osa05LNT0319900.1 5 Osa05LNG0319900 27403242-27404260 sense lncRNA 795 65.15723 2
Osa05LNT0320100.1 5 Osa05LNG0320100 27474112-27479029 long non-coding(lnc) isoforms of known genes 2065 46.97337 11
Osa05LNT0320100.3 5 Osa05LNG0320100 27474112-27479029 long non-coding(lnc) isoforms of known genes 2070 47.00483 11
Osa05LNT0320100.2 5 Osa05LNG0320100 27474112-27479029 long non-coding(lnc) isoforms of known genes 3326 43.86651 11
Osa05LNT0294000.1 5 Osa05LNG0294000 2748512-2752887 long non-coding(lnc) isoforms of known genes 3478 40.36803 7
Osa05LNT0521000.1 5 Osa05LNG0521000 27572103-27572356 intergenetic lncRNA (lincRNA) 254 38.18898 1
Osa05LNT0320200.1 5 Osa05LNG0320200 27592305-27598783 long non-coding(lnc) isoforms of known genes 5710 44.5359 4
Osa05LNT0294100.1 5 Osa05LNG0294100 2767388-2775242 long non-coding(lnc) isoforms of known genes 1524 47.76903 17
Osa05LNT0320300.1 5 Osa05LNG0320300 27733895-27738318 long non-coding(lnc) isoforms of known genes 3320 43.46386 7
Osa05LNT0320400.1 5 Osa05LNG0320400 27740218-27749755 long non-coding(lnc) isoforms of known genes 3938 43.60081 12
Osa05LNT0320500.1 5 Osa05LNG0320500 27759551-27763654 long non-coding(lnc) isoforms of known genes 2267 49.13983 8
Osa05LNT0294200.2 5 Osa05LNG0294200 2777390-2783543 long non-coding(lnc) isoforms of known genes 2773 43.09412 14
Osa05LNT0294200.1 5 Osa05LNG0294200 2777390-2783543 long non-coding(lnc) isoforms of known genes 2744 43.22157 14
Osa05LNT0320600.1 5 Osa05LNG0320600 27793450-27794243 intergenetic lncRNA (lincRNA) 794 47.98489 1
Osa05LNT0320700.1 5 Osa05LNG0320700 27886611-27889407 long non-coding(lnc) isoforms of known genes 2011 45.89756 7