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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0512200.1 5 Osa05LNG0512200 3166046-3166315 intergenetic lncRNA (lincRNA) 270 54.07407 1
Osa05LNT0512300.1 5 Osa05LNG0512300 3173777-3174050 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa05LNT0512400.1 5 Osa05LNG0512400 3173777-3174050 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa05LNT0294700.1 5 Osa05LNG0294700 3189795-3195510 long non-coding(lnc) isoforms of known genes 2588 43.3153 5
Osa05LNT0294900.1 5 Osa05LNG0294900 3233024-3237383 long non-coding(lnc) isoforms of known genes 3177 45.89235 6
Osa05LNT0294800.1 5 Osa05LNG0294800 3251082-3256034 long non-coding(lnc) isoforms of known genes 2622 50.87719 11
Osa05LNT0295000.1 5 Osa05LNG0295000 3313455-3319824 long non-coding(lnc) isoforms of known genes 2203 50.0227 15
Osa05LNT0295100.1 5 Osa05LNG0295100 3348862-3352787 long non-coding(lnc) isoforms of known genes 2185 43.79863 10
Osa05LNT0295200.1 5 Osa05LNG0295200 3439304-3443769 long non-coding(lnc) isoforms of known genes 2324 46.21343 9
Osa05LNT0295300.1 5 Osa05LNG0295300 3499107-3507534 long non-coding(lnc) isoforms of known genes 1764 53.23129 5
Osa05LNT0295400.1 5 Osa05LNG0295400 3561007-3571391 long non-coding(lnc) isoforms of known genes 1779 51.88308 10
Osa05LNT0295500.1 5 Osa05LNG0295500 3652897-3653860 long non-coding(lnc) isoforms of known genes 660 43.63636 2
Osa05LNT0295600.1 5 Osa05LNG0295600 3704302-3714723 long non-coding(lnc) isoforms of known genes 7585 45.76137 13
Osa05LNT0295700.2 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5989 41.62631 7
Osa05LNT0295700.3 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5900 41.83051 8
Osa05LNT0295700.1 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5027 41.0185 8
Osa05LNT0290800.1 5 Osa05LNG0290800 372788-375616 long non-coding(lnc) isoforms of known genes 1325 46.49057 5
Osa05LNT0295800.1 5 Osa05LNG0295800 3816363-3817092 Antisense lncRNA 475 46.73684 3
Osa05LNT0295900.1 5 Osa05LNG0295900 3876382-3972390 sense lncRNA 3597 39.67195 2
Osa05LNT0290200.1 5 Osa05LNG0290200 38790-47165 long non-coding(lnc) isoforms of known genes 4754 44.29954 23
Osa05LNT0512500.1 5 Osa05LNG0512500 4030998-4031276 intergenetic lncRNA (lincRNA) 279 56.98925 1
Osa05LNT0296000.1 5 Osa05LNG0296000 4096771-4100732 long non-coding(lnc) isoforms of known genes 1273 46.97565 11
Osa05LNT0290900.1 5 Osa05LNG0290900 421312-432965 long non-coding(lnc) isoforms of known genes 4636 44.21915 26
Osa05LNT0296100.1 5 Osa05LNG0296100 4309927-4310629 intergenetic lncRNA (lincRNA) 620 53.06452 2
Osa05LNT0296200.1 5 Osa05LNG0296200 4801878-4803277 intergenetic lncRNA (lincRNA) 1400 57.64286 1
Osa05LNT0512600.1 5 Osa05LNG0512600 4807213-4807522 intergenetic lncRNA (lincRNA) 310 53.22581 1
Osa05LNT0296300.1 5 Osa05LNG0296300 4828195-4828820 intergenetic lncRNA (lincRNA) 626 45.84665 1
Osa05LNT0296400.1 5 Osa05LNG0296400 4831545-4835649 long non-coding(lnc) isoforms of known genes 2601 46.48212 4
Osa05LNT0296500.1 5 Osa05LNG0296500 4887344-4890234 long non-coding(lnc) isoforms of known genes 1030 44.36893 5
Osa05LNT0512700.1 5 Osa05LNG0512700 4987195-4987395 intergenetic lncRNA (lincRNA) 201 27.36318 1
Osa05LNT0296600.1 5 Osa05LNG0296600 4998309-4999626 long non-coding(lnc) isoforms of known genes 799 55.06884 3
Osa05LNT0296700.2 5 Osa05LNG0296700 5254254-5262132 long non-coding(lnc) isoforms of known genes 1869 45.96041 10
Osa05LNT0296700.1 5 Osa05LNG0296700 5254254-5262132 long non-coding(lnc) isoforms of known genes 1841 46.0076 10
Osa05LNT0296800.1 5 Osa05LNG0296800 5266519-5277751 long non-coding(lnc) isoforms of known genes 778 56.2982 4
Osa05LNT0296900.1 5 Osa05LNG0296900 5284540-5287858 intergenetic lncRNA (lincRNA) 968 45.45455 3
Osa05LNT0297000.1 5 Osa05LNG0297000 5455649-5458451 intergenetic lncRNA (lincRNA) 674 56.97329 3
Osa05LNT0512900.1 5 Osa05LNG0512900 5691426-5691699 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa05LNT0512800.1 5 Osa05LNG0512800 5691426-5691699 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa05LNT0297100.1 5 Osa05LNG0297100 5756474-5760791 long non-coding(lnc) isoforms of known genes 1500 50.0 11
Osa05LNT0297200.1 5 Osa05LNG0297200 5818039-5821462 intergenetic lncRNA (lincRNA) 714 50.70028 3
Osa05LNT0513100.1 5 Osa05LNG0513100 5933534-5933778 intergenetic lncRNA (lincRNA) 245 25.30612 1
Osa05LNT0513000.1 5 Osa05LNG0513000 5933534-5933778 intergenetic lncRNA (lincRNA) 245 25.30612 1
Osa05LNT0513200.1 5 Osa05LNG0513200 5989240-5989482 intergenetic lncRNA (lincRNA) 243 23.04527 1
Osa05LNT0513300.1 5 Osa05LNG0513300 5989240-5989483 intergenetic lncRNA (lincRNA) 244 22.95082 1
Osa05LNT0513400.1 5 Osa05LNG0513400 5989550-5989822 intergenetic lncRNA (lincRNA) 273 25.27473 1
Osa05LNT0513500.1 5 Osa05LNG0513500 5989550-5989822 intergenetic lncRNA (lincRNA) 273 25.27473 1
Osa05LNT0513600.1 5 Osa05LNG0513600 6106827-6107034 intergenetic lncRNA (lincRNA) 208 40.86538 1
Osa05LNT0297300.3 5 Osa05LNG0297300 6198344-6200904 intergenetic lncRNA (lincRNA) 1518 47.62846 4
Osa05LNT0297300.1 5 Osa05LNG0297300 6198344-6200904 intergenetic lncRNA (lincRNA) 2130 43.38028 2
Osa05LNT0297300.4 5 Osa05LNG0297300 6198344-6200904 intergenetic lncRNA (lincRNA) 944 52.22458 3