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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0014200.1 1 Osa01LNG0014200 10119527-10120347 intronic lncRNA 821 43.72716 1
Osa01LNT0014300.1 1 Osa01LNG0014300 10346364-10349986 long non-coding(lnc) isoforms of known genes 2814 43.4968 3
Osa01LNT0014400.1 1 Osa01LNG0014400 10515066-10515961 Antisense lncRNA 494 48.98785 4
Osa01LNT0014500.1 1 Osa01LNG0014500 10515442-10516652 long non-coding(lnc) isoforms of known genes 1028 45.62257 3
Osa01LNT0014600.2 1 Osa01LNG0014600 10518410-10522215 Antisense lncRNA 1965 57.09924 7
Osa01LNT0014600.1 1 Osa01LNG0014600 10518410-10522215 Antisense lncRNA 2497 55.02603 7
Osa01LNT0014700.1 1 Osa01LNG0014700 10805527-10808064 long non-coding(lnc) isoforms of known genes 1713 51.25511 3
Osa01LNT0014800.1 1 Osa01LNG0014800 10814139-10818530 long non-coding(lnc) isoforms of known genes 1242 47.98712 11
Osa01LNT0014900.1 1 Osa01LNG0014900 10943217-10944050 intronic lncRNA 834 46.28297 1
Osa01LNT0015000.1 1 Osa01LNG0015000 10944727-10945059 intronic lncRNA 333 63.36336 1
Osa01LNT0015100.1 1 Osa01LNG0015100 10980741-10983339 long non-coding(lnc) isoforms of known genes 2274 43.44767 4
Osa01LNT0015100.2 1 Osa01LNG0015100 10980741-10983339 long non-coding(lnc) isoforms of known genes 1462 47.94802 4
Osa01LNT0015200.1 1 Osa01LNG0015200 11025448-11038937 long non-coding(lnc) isoforms of known genes 4075 42.99387 27
Osa01LNT0015300.1 1 Osa01LNG0015300 11089065-11093985 long non-coding(lnc) isoforms of known genes 2107 46.65401 3
Osa01LNT0015400.1 1 Osa01LNG0015400 11253654-11266441 long non-coding(lnc) isoforms of known genes 3726 47.2088 13
Osa01LNT0015400.2 1 Osa01LNG0015400 11253654-11266441 long non-coding(lnc) isoforms of known genes 3687 47.21996 13
Osa01LNT0015400.3 1 Osa01LNG0015400 11253654-11266441 long non-coding(lnc) isoforms of known genes 3771 46.8576 11
Osa01LNT0001200.2 1 Osa01LNG0001200 1145920-1155175 long non-coding(lnc) isoforms of known genes 3115 46.54896 20
Osa01LNT0001200.1 1 Osa01LNG0001200 1145920-1155175 long non-coding(lnc) isoforms of known genes 3140 46.52866 20
Osa01LNT0001000.1 1 Osa01LNG0001000 1160198-1164619 long non-coding(lnc) isoforms of known genes 992 56.65323 4
Osa01LNT0015600.2 1 Osa01LNG0015600 11625293-11637356 long non-coding(lnc) isoforms of known genes 3945 44.84157 20
Osa01LNT0015600.1 1 Osa01LNG0015600 11625293-11637356 long non-coding(lnc) isoforms of known genes 3940 44.8731 20
Osa01LNT0455200.1 1 Osa01LNG0455200 11640550-11640811 intergenetic lncRNA (lincRNA) 262 27.48092 1
Osa01LNT0015500.1 1 Osa01LNG0015500 11670153-11670504 intergenetic lncRNA (lincRNA) 352 60.79545 1
Osa01LNT0001100.2 1 Osa01LNG0001100 1168737-1171126 long non-coding(lnc) isoforms of known genes 1274 49.05808 3