Transcript

Sequence

>Osa03LNT0231400.1

GCCGAGCTCAGCAGCGCGAGCTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGGGCCTGGGTTGGCAGTGCCATAGATGGCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTGAGCGAAAGCTCTGGCCTCACGTTTCCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTTCACAGAGCAGCGAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGCTGGCCCGCTTGGGTCTCGCAGCCTACTCCAACGGACCACCACTTTT

Coding Potentia

Explanation	CPC Score
noncoding	-1.26909

Genome Browser

Expression

Axis x: Treatment
Axis y: FPKM
Value above bar: Standard deviation

Variation

Transcript ID	Chromosome	Locus	Ref	Alt

Transposon

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

small RNA targets

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

QTL

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0231400.1	3	nan	Resistance or Tolerance	Drought tolerance	C136	R1618
Osa03LNT0231400.1	3	nan	Morphological trait	Panicle/flower	RZ448	RZ403
Osa03LNT0231400.1	3	nan	Morphological trait	Shoot/Seedling	RZ403	RZ630
Osa03LNT0231400.1	3	nan	Morphological trait	Shoot/Seedling	RZ452	RZ448
Osa03LNT0231400.1	3	nan	Resistance or Tolerance	Drought tolerance	C136	R1618
Osa03LNT0231400.1	3	nan	Resistance or Tolerance	Drought tolerance	C746	RZ448

pre-miRNA

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

GWAS

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus