>Osa06LNT0496700.1

AATGTTTGACACCATTGACTTTTTTAAACATGTTTGACCGTTCGTCTTATTAAAAACTTTTGTGATATGTGTAAAACTATATGTATACATAAAAGTATATTTAACAATAAATCAAATGATAGAAAAAGAAATAATAATTACTTAAATTTTTAAATAAGACGAACGGTCAAACATTTTTAAAAAAGTCAACGGCGTTAAATATT

Explanation	CPC Score
noncoding	-1.26109

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa06LNT0496700.1	osa-miR812s	Translation	3.0	13.264	1	24
Osa06LNT0496700.1	osa-miR812a	Cleavage	3.5	11.529	1	22
Osa06LNT0496700.1	osa-miR812b	Cleavage	3.5	11.529	1	22
Osa06LNT0496700.1	osa-miR812c	Cleavage	3.5	11.529	1	22
Osa06LNT0496700.1	osa-miR812d	Cleavage	3.5	11.529	1	22
Osa06LNT0496700.1	osa-miR812e	Cleavage	3.5	11.529	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0496700.1	6	alk6-1	Physiological trait	Eating quality	RM190	RM253
Osa06LNT0496700.1	6	hr6	Physiological trait	Eating quality	RM190	RM253
Osa06LNT0496700.1	6	qAC-6	Physiological trait	Eating quality	RM190	RM510
Osa06LNT0496700.1	6	qGC-6	Physiological trait	Eating quality	RM190	RM510
Osa06LNT0496700.1	6	nan	Resistance or Tolerance	Drought tolerance	RM170	RM204
Osa06LNT0496700.1	6	nan	Morphological trait	Shoot/Seedling	OSR19	RM225
Osa06LNT0496700.1	6	AsTol	Resistance or Tolerance	Other soil stress tolerance	RZ516	RG213
Osa06LNT0496700.1	6	Lhd1(t)	Physiological trait	Flowering	nan	nan
Osa06LNT0496700.1	6	En-Se1	Physiological trait	Flowering	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus